KEGG   Megasphaera hexanoica: ACT01_07735
Entry
ACT01_07735       CDS       T05536                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
mhw  Megasphaera hexanoica
Pathway
mhw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACT01_07735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhw03019]
    ACT01_07735
   03009 Ribosome biogenesis [BR:mhw03009]
    ACT01_07735
Messenger RNA biogenesis [BR:mhw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ACT01_07735
Ribosome biogenesis [BR:mhw03009]
 Prokaryotic type
  rRNA helicases
   ACT01_07735
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 SecA_DEAD ArabFuran-catal PhoH
Other DBs
NCBI-ProteinID: AXB82137
Position
complement(1651539..1652804)
AA seq 421 aa
MKTFQTLGVTPELTNLLHTQGINEPTAVQAQSIPAIFKGRDVLAQAQTGTGKTLAFLLPA
LQQIRTDLSREQVLIVAPTRELAKQIADVALTLAPSLSVDVLSLIGGKTIENQLQKLHRH
PHVIIGTPGRLLDHCGRNSLDLSHVRRIIVDEADQMLQSGFLEDIDTLIAMTPSNRQLLF
FSATIPDKIRSLAKKHMTHPLVLNILEGDTIALDTIEQRIYMVQEEKKLDLLCQMLADMN
PYLAIVFCNTKERTSWLAGELIARGFNIGELHGDMSQGRRSQVLRDFSRARTQILVATDI
AARGIDIEGITHVFSYDVPHDVDYYIHRIGRTGRAGSEGLAIMFATAADENWVRRIEHTI
EATITKYAANGQIRVKAKNAAPKKKKVYKDKLPASTYQTTKEKHHKTLHKGGDNRRRRKK
Q
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaaacattccagacactcggcgttacgccggaattaaccaatctattgcatacacag
ggcatcaatgaaccgactgccgttcaggcccagtctattcccgccatattcaaaggacgg
gatgtcctggcccaggcacagaccggtacaggcaaaacgctggcttttctactgccagcc
ctgcagcagatccgtaccgatttatcgcgcgaacaggtgctgattgtcgcacctacgcgt
gaactggccaaacagattgccgacgtggcattgactctggcgccatcgctttctgtcgat
gtgctcagcctgattggcggcaaaaccatcgaaaatcagctccagaagctccatcgccac
ccccacgtcatcattggtacccccggccggcttctcgaccactgtggccgtaattccctc
gatttatcccatgtacggcggatcatcgtcgatgaagccgaccagatgctgcagtcggga
ttcctggaagacattgacacactcattgccatgacgccgtccaacagacagctgcttttc
ttctctgccaccatccccgataaaatccgcagtctggctaaaaagcatatgactcatccg
ttagtcctcaatatccttgaaggcgataccattgctctggatacgattgaacagcggatt
tacatggtccaggaagaaaaaaaactggatcttctctgccagatgctggccgatatgaat
ccctatctggctattgtgttctgcaacacgaaagagcgcacgtcctggctggcgggagaa
ctcattgcccgcgggttcaacatcggtgaactccacggcgatatgagtcagggtcgccgc
agccaggtattgcgtgatttttccagagcccgtacccagattctggtcgcaaccgatatt
gcagcccggggcatcgatatcgaaggcattactcacgttttcagctatgatgtcccccac
gacgtcgattactatatccatcgcataggccgcacgggccgtgccggcagtgaaggattg
gccatcatgtttgctaccgctgccgatgaaaactgggtacgccgtatcgaacacacgatt
gaagcgacaattaccaaatatgccgccaatggtcagatacgggtcaaagcaaaaaacgcg
gcaccaaagaaaaagaaagtatacaaagacaagcttccggccagcacctatcagaccacg
aaagaaaaacaccataaaacattgcataaaggcggagataaccggcgccgtcggaagaaa
caataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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