KEGG   Microbulbifer hydrolyticus: GTQ55_08155
Entry
GTQ55_08155       CDS       T06404                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mhyd  Microbulbifer hydrolyticus
Brite
KEGG Orthology (KO) [BR:mhyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhyd03032]
    GTQ55_08155 (topA)
   03400 DNA repair and recombination proteins [BR:mhyd03400]
    GTQ55_08155 (topA)
Enzymes [BR:mhyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GTQ55_08155 (topA)
DNA replication proteins [BR:mhyd03032]
 Prokaryotic type
  DNA Topoisomerases
   GTQ55_08155 (topA)
DNA repair and recombination proteins [BR:mhyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GTQ55_08155 (topA)
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom Toprim_4
Other DBs
NCBI-ProteinID: QHQ38958
UniProt: A0A6P1T845
Position
1934968..1937703
AA seq 911 aa
MGKSLVIVESPAKAKTINKYLGKDFVVKSSIGHIRDLPTGASNKKPVDAKERARRAAETR
KLSPEQKEIYKRKKSREQLIKRMGIDPDHNWEAHYEILPGKEKVVDELRKLAANADHVYL
ATDLDREGEAIAWHLREAIGGDESRYRRVVFNEITKSAIQEAFKDPGPLDIDRVNAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADTQT
AKTDALRLEVKKQSGEAFRPTNEEQAMSALKALQASDFEVTARDDKPTSSKPSAPFITST
LQQAASNRLGFSVKKTMMMAQRLYEAGYITYMRTDSTNLSAEAVSSVRDFIVENYGDKYL
PENPNRYSSKEGAQEAHEAIRPSDVRVKPNMLSGMERDAERLYTLIWQQFVACQMTPAQF
TSTSVVVTAGDFELRTRGRVIRFDGFLKVAPAQSKKDEDLVLPDIKVGEKLNLKKLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFTDLMDYGFTASLEESLDSVAEGNRGWKDLLNDFYSDFSARLEAAQDKEHGMRRN
APTDTDIECSQCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVSGEEAVDADKDED
AETRQLREKRRCGKCGTAMDSYLVDEHRKLHICGNNPDCPGFEVEKGTFKIKGYDGPVIE
CDKCGADMQLKSGRFGKYFGCTSETCKNTRKLLKSGQPAPPKMDPVPMPELPCEKVEDTY
ILRDGASGLFLAASQFPKNRETRAPLIKELLPHKDEIDPKYSFLFSAPVEDNEGRDTVVR
FSRKTQEQYVQSEEEGKATGWKAFYRDGKWQVEEPAKKKPAVKKKAAAKKKAPAKKKAAA
KKAPSKKAPAK
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgggtaaatcactggtcatcgtcgagtcgccggcgaaggcaaaaacaatcaacaagtat
ctcggaaaggactttgtcgtgaagtccagtatcggtcatatccgggatcttcccaccggc
gcttccaacaagaagccggtcgatgccaaagagcgtgcccgtcgcgcggcggaaacccgc
aagctttctccggaacagaaagagatctacaagcgcaagaaaagccgtgaacagctgatc
aagcgcatgggaattgacccggatcacaactgggaagcccactacgagatcctgcccggc
aaggaaaaggtggtggacgagctacgcaagctcgctgccaacgccgaccacgtctacctc
gcaacggacttggaccgcgaaggggaagccatcgcatggcacctgcgggaagccattggt
ggtgacgagtcgcgctatcgtcgtgtggtgttcaatgagatcaccaagtcggcgatccag
gaggcgtttaaagatccaggtccgctggatatcgaccgggtaaatgctcagcaggcgcgc
cggttccttgaccgcattgtgggatacatggtgtccccgctgttgtgggaaaaagtcgcc
cgtggtctttccgctggccgggtgcagtcggttgccgtgcgtcttgtggtggaacgcgag
cgggaaattcgcgcgtttatccccgaggaatactggacgctgtttgcggatacgcagacc
gcaaaaaccgatgcgctgcgcctggaggtcaaaaagcagtccggcgaggccttccgcccg
accaacgaagagcaggcgatgtcggccctcaaggcgttgcaggccagcgattttgaggtc
actgcccgggacgacaagcctacgagctcaaagcccagtgcgccttttattacttcgaca
ctgcaacaagcggcgagcaatcgccttggtttcagcgtaaagaaaaccatgatgatggcc
cagcgtctgtacgaagcgggttacatcacctacatgcgtaccgactccaccaatctcagt
gccgaggcggtgtcttccgtacgcgactttatcgtcgaaaattacggcgacaagtacctg
ccggaaaaccccaaccgctacagcagtaaagagggcgcgcaagaagcgcacgaggcgatc
cgcccctccgacgtgcgggtgaagccgaatatgctgtccggcatggagcgggacgccgag
cgcctgtacaccttgatctggcaacagtttgtggcctgccagatgacgcctgctcagttc
acttccacctcggtagtggttactgcgggtgactttgaattgcgtacccgtggtcgcgtt
attcgcttcgatggtttcctgaaagtcgcgcccgcccagagcaagaaagacgaagatctg
gtactgcctgatatcaaggtcggcgaaaagctcaacctgaagaaactcgatccgaagcag
cactttaccaagccgccggcgcgcttcagcgaagctgcactggttaaagagctggaaaag
cgcggtatcggtcgcccgtccacctatgcgtcgattatttccaccattcaggaccgcggc
tatgtacggctggaaaaccgccgtttctacgcggaaaaaatgggcgacatcgtcaccgat
cgcctgagcgagagcttcaccgacctgatggattatggttttaccgccagcctggaggaa
tccctggattccgttgccgaaggcaatcgcggctggaaagacctgctcaacgatttctat
tccgacttcagcgcgcgcctcgaagccgcgcaggacaaggaacacggcatgcgccgcaac
gcaccgaccgataccgatatcgagtgcagccagtgcggtcgccatatgcagattcgcacc
ggttctaccggggttttccttggctgttccggctatgcactgccgcccaaagagcgttgc
accaacaccatgaacctggtgtccggtgaggaagcggttgacgcggacaaggacgaggat
gcggaaacccggcagctgcgcgaaaaacgccgttgcggcaaatgcggtaccgccatggac
agctacctggtggacgagcatcgcaaattgcatatttgcggtaataacccggattgcccc
gggtttgaggtggagaagggcacattcaagatcaagggttatgacggcccggtgatcgag
tgcgacaaatgcggtgcggacatgcagttgaaatcgggccgtttcggcaagtatttcggt
tgcaccagcgagacctgtaaaaatacccgcaaactgttgaaaagtggccagccggcaccg
ccgaaaatggacccggttccgatgcccgagcttccgtgcgagaaggtggaagatacctac
attcttcgcgatggcgcctcaggactgttcctcgcagcgagccagttcccgaaaaaccgg
gagacccgtgcgccgttgatcaaggaactgttgccgcacaaagacgagattgatccgaag
tacagcttcctgttctcggcgcctgtggaagacaatgaaggccgcgacaccgtggtgcgc
ttcagccgcaagacccaggaacagtacgtgcagtctgaggaagagggcaaggcaaccggt
tggaaagcgttctatcgcgacggcaagtggcaggtagaagagccggcgaagaagaaaccg
gcagtcaagaaaaaagctgctgcgaagaaaaaagcaccggcgaaaaagaaggccgccgcg
aaaaaggcgccctctaaaaaagcgcccgccaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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