KEGG   Methanomethylovorans hollandica: Metho_1282
Entry
Metho_1282        CDS       T02418                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mhz  Methanomethylovorans hollandica
Pathway
mhz03030  DNA replication
mhz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mhz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metho_1282
   03410 Base excision repair
    Metho_1282
   03450 Non-homologous end-joining
    Metho_1282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhz03032]
    Metho_1282
   03400 DNA repair and recombination proteins [BR:mhz03400]
    Metho_1282
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mhz04147]
    Metho_1282
DNA replication proteins [BR:mhz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metho_1282
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metho_1282
DNA repair and recombination proteins [BR:mhz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metho_1282
Exosome [BR:mhz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metho_1282
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AGB49505
UniProt: L0KXS9
Position
complement(1270839..1271864)
AA seq 341 aa
MGTQIGSLLTKNPTTYEELAGKVIAIDAYNTIYQFLSAIRQKNGSLLTDASGNPTSHLTG
LFSRTCKLRDANIKPIFIFDGKPPQMKERTLEKRKECKQLAARNYEIAREGGDLEGMKKF
AQGTSCITPHILKESKKLLELMGIPWMQAESEAEAQAAFMTLRGDADLVGSQDYDAFLFG
AKNVVRNLGSTGKRKLPGKAAYVPKNPEHISLANSLGQLNITREQLIDVAICIGTDFNEG
IHRVGPKTALKLILRHRDINTLLREEKKEINTCVSVEEIRDFFMNPPVTTDYTLRWKKPR
SDELFEFLVKKHSFSEKQIIKNTGILENKARGESQSCLGDW
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggtactcaaattggttcattgctcacaaaaaatcctacaacttacgaggaactggca
ggtaaagtgatagctatcgatgcatacaatacgatctatcagttccttagtgccatccga
caaaagaatggctctttattaactgacgcttcaggtaaccctacttcccatcttaccgga
ctgttctcacggacctgcaaactaagagatgccaatatcaaacccattttcatatttgat
ggcaaaccaccgcaaatgaaagaacgtacactggagaaacgcaaggagtgtaaacagctt
gcagcccgtaattatgagatcgcaagagaggggggtgatctggagggtatgaagaaattc
gctcagggaacttcctgtatcacacctcatatactgaaggaatcaaaaaagctccttgaa
cttatgggcattccatggatgcaggctgaatccgaagcagaggcccaggcagcgttcatg
acgttgcgcggggatgctgatcttgtaggatcacaggactatgacgcttttcttttcgga
gccaagaatgttgtgcgtaatctggggagcacaggcaaacgaaaactccccggaaaggct
gcatatgttccaaagaacccggaacatatttcccttgcaaattccctgggacagctgaac
atcacacgtgaacaacttatcgatgttgccatctgtatcggcacagatttcaatgaaggt
atacatcgggtgggtccgaagaccgcgcttaagctcattctcaggcacagggatattaac
acgctgctcagggaagagaaaaaagagatcaatacatgtgtttctgtagaggagataagg
gatttctttatgaaccctccggtaacaaccgattataccctcagatggaaaaagccgagg
tcagatgaattatttgaattcctggtcaaaaaacatagtttttctgaaaaacagatcata
aagaatactgggatcctggaaaacaaagccagaggtgaatcccagtcctgccttggagat
tggtaa

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