KEGG   Methanomethylovorans hollandica: Metho_2379
Entry
Metho_2379        CDS       T02418                                 
Name
(GenBank) putative ATPase, Rnase L inhibitor (RLI) like protein
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
mhz  Methanomethylovorans hollandica
Brite
KEGG Orthology (KO) [BR:mhz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mhz03009]
    Metho_2379
Ribosome biogenesis [BR:mhz03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    Metho_2379
SSDB
Motif
Pfam: ABC_tran SMC_N RLI AAA_21 Fer4 Rad17 AAA_16 AAA_29 RNA_helicase AAA_23 Fer4_21 Fer4_6 AAA_15 Fer4_2 RsgA_GTPase Fer4_9 Fer4_7 VapE-like_dom AAA NB-ARC Fer4_10 Fer4_4 Fer4_3
Other DBs
NCBI-ProteinID: AGB50529
UniProt: L0L2K6
Position
complement(2340896..2342662)
AA seq 588 aa
MRIAILNKDRCQPRRCSHECEKYCPRVRTGDETIIFAEDGKPFISEELCVGCGICINRCP
FDAIMIIGLPEALKFPTHRYGPNGFALYGLPVPQKGRVTGILGPNGIGKSTAVQILSGRL
VPNFGEEGGTWDRVLEHYAGTALYDYFKAVANDSLKVSQKPQYIDLIPKAFKDKTSALLA
RTDDRGIMDELVERLDLSHIVDRNITELSGGELQRVAIAACAAKDADFYFFDEISPYLDI
YQRINCAKLIQEIAQEKAVLVVEHDLAILDMLADIVHVAYGEPGGYGVMTLPKGVRIAIN
QYLKGYLPEENVRVRPEAISFEVHPPRNETEIDTLVDYSSFSKKYKEGFALETDSGSIKQ
GEVLGIVGPNGIGKSTFMKVLAGEVEPDEGKLDMNISISYKPQYIKADIHMQVQFFLRGI
SRKFDSSYFQTEVVKPLGLEKLYERSIPELSGGELQRVAITACLCRDADMYLLDEPSAHL
DVEQRSMVTKVIKRFAENNGKTAMVVDHDIYMIDMLSERLIVFEGEPAVYGKAHAPLSMH
DGMNKFLSNLNITFRRDEDTRRPRVNKPDSRLDREQRSKGEYYYNVLE
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcgaatagccatacttaacaaggacagatgccagcctcgaaggtgcagtcatgaatgc
gagaagtactgcccgagagtgagaacaggtgacgagactattatctttgcagaagacggc
aagccgttcatatcggaagagttgtgtgttggctgtggtatctgtataaacaggtgtcct
tttgatgctattatgatcattggtcttcctgaagcccttaaattcccaacacaccgttat
ggtccgaatggctttgcgctttacggtttaccagttccccaaaaaggcagagttactggt
attcttggtccgaacggtattggtaaaagtactgcagtacagatcctctcaggaaggctg
gtgcccaactttggagaggaggggggtacatgggacagggtactggaacactatgcaggt
actgcactttatgattacttcaaagctgtagctaatgacagtcttaaggtttcccagaaa
cctcagtatattgatcttattccgaaagctttcaaagataagacatcggccctgcttgcc
aggactgatgataggggaataatggatgagctggtggagcgcctggacctttctcacatc
gttgaccgcaatatcacggaactcagtggtggcgagctccagagggtagctattgctgca
tgcgctgcaaaagatgcagatttctattttttcgatgagataagcccctatctggacata
taccagcgtatcaactgtgccaagttaatacaggagattgctcaggaaaaagctgtgctt
gtagtggaacatgatcttgccattctggacatgttggccgatattgtacatgtggcgtat
ggtgaacccggtggttatggtgtcatgacgcttcccaaaggggtgcgcatagccattaac
caatatctcaaaggttatctgcccgaggagaatgtgcgtgtccgtcccgaagctatatcc
ttcgaggtacatcctccgaggaatgaaactgagatcgataccctggtggattatagtagt
ttttccaaaaaatacaaggaaggattcgctctggaaacagattccggatctattaaacag
ggtgaagtgctgggtatagtaggaccaaatggtataggtaaatccactttcatgaaagtg
cttgcaggggaagtagaacccgatgaaggcaagcttgatatgaatatcagtatttcttac
aaaccccagtacatcaaggctgatattcacatgcaggtccaattcttcctgcggggtata
tctcggaagttcgacagcagctacttccagacagaagtagtaaaacctttaggtcttgag
aagctgtatgagcggtctattccggaacttagcggtggtgaattgcagagggtggccata
actgcatgtctgtgccgcgatgcggatatgtatcttctggacgaaccaagcgcccacctt
gatgtggaacagcggtcaatggtcacgaaagtgataaagcgttttgctgagaacaacggt
aaaactgccatggtggtggaccatgatatatatatgatcgatatgctgagtgaaaggcta
atagttttcgagggtgaaccggctgtatatggtaaggcccacgcacctttaagtatgcat
gatggcatgaacaaattcctttctaatctgaatatcacgttccgccgtgatgaggatacg
cgcaggcccagggtgaacaaacctgactcccgtcttgaccgcgaacaaagatccaaaggg
gaatattattataatgttctggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system