KEGG   Micromonospora sp. HM134: FJK98_02715
Entry
FJK98_02715       CDS       T06145                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mich  Micromonospora sp. HM134
Pathway
mich03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mich00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FJK98_02715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mich03400]
    FJK98_02715
Enzymes [BR:mich01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FJK98_02715
DNA repair and recombination proteins [BR:mich03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FJK98_02715
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: QDY06208
UniProt: A0A518WAC7
Position
528342..529250
AA seq 302 aa
MPERVKVEVDGRALELSNLDKVLYPEAGFTKGEVIDYYTRIAPVLLPHLADRALTRIRFP
NGVTGGSFFEKNAPAATPAWVRTETLPVPGSSRGRETIDYVVADDLPTLVWLANLAALEL
HTPQWRIGTHPDLMVVDLDPGPPATLRHCCQVAVLLRDRLARDGVTAYPKTSGKKGMQLC
CPISATQDADLVSDYAKRIAQELEREHPKLVVSRMAKNLRPGKVFIDWSQNNAAKTTVAP
YSLRAQAVPAVSTPLTWDEVEAGAAGKRPSAKPYPAGEVLRRVEKQGDLLAPLLDGGPVL
PA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctgagcgggtgaaggtggaggtcgacggccgggcgttggagctgtccaacctggac
aaggtgctctacccggaggccggtttcaccaagggcgaggtgatcgactactatacccgg
atcgccccggtgctgctgccgcacctggccgaccgggcgctgacccggatccggttcccc
aacggcgtcaccggtggctcgttcttcgagaagaacgcccccgccgccacccccgcctgg
gtacgcaccgagacgctgcctgtgcccgggtcgagcaggggccgggagaccatcgactac
gtggtcgccgacgacctgcccaccctggtctggctggccaacctggccgccctcgaactg
cacaccccgcagtggcggatcggcacccacccggacctgatggtggtcgacctcgacccg
ggcccgccggccaccctgcgccactgctgccaggtggccgtcctgctgcgcgaccggctc
gcccgcgacggggtgacggcgtacccgaagacctccggcaagaagggcatgcagctctgc
tgcccgatcagcgccacccaggacgccgatctcgtctccgactacgcgaagcggatcgcc
caggagctggaacgcgaacacccgaagctggtcgtgtcgcggatggcgaagaacctgcgg
cccggcaaggtcttcatcgactggagccagaacaacgcggcgaagacgacggtcgcgccg
tactcgctgcgggcacaggcggtgccggcggtgtccacgccgctgacctgggacgaggtc
gaggcgggggcggccgggaagcggccttcggcgaagccgtacccggcgggggaggtgctg
cggcgggtggagaagcagggagatctgctcgccccgctgctcgacggcggcccggtgctg
ccggcgtga

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