KEGG   Micrococcus sp. KBS0714: B1A86_00008445
Entry
B1A86_00008445    CDS       T06141                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mick  Micrococcus sp. KBS0714
Pathway
mick03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mick00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B1A86_00008445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mick03021]
    B1A86_00008445
   03400 DNA repair and recombination proteins [BR:mick03400]
    B1A86_00008445
Enzymes [BR:mick01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B1A86_00008445
Transcription machinery [BR:mick03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B1A86_00008445
DNA repair and recombination proteins [BR:mick03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B1A86_00008445
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 PASTA
Other DBs
NCBI-ProteinID: QDW17891
Position
complement(1860198..1861196)
AA seq 332 aa
MLIAQRPTLTEEVVSDRRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFSTVNGVKEDVTEIILNIKKLSVSSENDEPVVAYLRKQGAGVVTAADITAPAGVEVHN
PDLHIATLNAKGKFDMELTIERGRGYVTAAQNKSADAEIGRIPVDSIYSPVLKVTFKVEA
TRVEQRTDFDRLILDVETKENMLPRDAVASAGSTLVELFGLARSLNVEAEGIDLGDEPDV
VEGSADLAQPIEELELTVRSYNCLKREGIHTVGELVGRSEADLMDIRNFGAKSIDEVKEK
LQELGLSLKDSPAGYDPQAHARQMDDDPFSDF
NT seq 999 nt   +upstreamnt  +downstreamnt
gtgctcattgcacagcgccccacgctgaccgaagaggtcgtctccgaccgtcgttcccgg
ttcgtcatcgagcccctggagcccggcttcggctacaccctcggcaactccctgcgccgc
actctgctctcgtcgatccccggtgctgccgtgaccagcatccgcgtggacggcgtgctg
cacgagttcagcaccgtcaacggagtcaaggaggatgtcaccgagatcatcctcaacatc
aagaagctctccgtctcctcggagaacgacgagcccgtggtggcctacctgcgcaagcag
ggggccggcgtcgtcaccgccgcggacatcaccgcgccggccggcgtcgaggtccacaac
ccggacctgcacatcgcgaccctgaacgcgaagggcaagttcgacatggagctgaccatc
gagcgcggtcgcggctacgtgaccgccgcccagaacaagtccgcggatgcggagatcggc
cgcatcccggtcgactccatctactcaccggtcctcaaggtgaccttcaaggtcgaggcc
acccgtgtggagcagcgcaccgacttcgaccgtctgatcctggacgtggagaccaaggag
aacatgctgccgcgtgacgcggtggcctctgccggctccaccctggtcgagctgttcggc
ctggcccgctcgctcaacgtcgaggccgagggcatcgacctgggcgatgagcccgatgtc
gtcgagggctccgccgacctggctcagccgatcgaggagctcgagctcaccgtgcgctcg
tacaactgcctcaagcgcgagggcatccacaccgtgggcgagctcgtgggccgttccgag
gccgacctgatggacatccgcaacttcggcgcgaagtccatcgacgaggtcaaggagaag
ctccaggagctgggcctgtccctcaaggactcgccggccggctacgacccgcaggcgcac
gcgcgccagatggacgacgacccgttctcggacttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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