KEGG T06141: B1A86

Micrococcus sp. KBS0714: B1A86_00009065

Entry

B1A86_00009065    CDS       T06141

Symbol

topA

Name

(GenBank) type I DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mick Micrococcus sp. KBS0714

Brite

KEGG Orthology (KO) [BR:mick00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mick03032]
    B1A86_00009065 (topA)
   03400 DNA repair and recombination proteins [BR:mick03400]
    B1A86_00009065 (topA)
Enzymes [BR:mick01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     B1A86_00009065 (topA)
DNA replication proteins [BR:mick03032]
Prokaryotic type
  DNA Topoisomerases
   B1A86_00009065 (topA)
DNA repair and recombination proteins [BR:mick03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B1A86_00009065 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4

Other DBs

NCBI-ProteinID:

QDW18006

Position

complement(1977489..1980323)

AA seq 944 aa
MSTSSASVTAPVPEGKKLVIVESPAKSKSIAKYLNAVGSGWVVDSSVGHIRDLPKPSDLP
ADMKKGPFGKFAVDTEHGFTPYYVVHPDKKKKVAELKRELKDAEALYLATDADREGEAIA
WHLLDTLKPTVPVYRMTFGEITQEGVRRGLENIRELDTALVDAQETRRILDRLFGYELSP
VLWRKVSRGLSAGRVQSVATRLVVERERERMAFVSAHYWGVEGTFTVAEGAQAADAVGSS
FTARLSTVDGERVATGRDFDDAGRLKASAGKKVTHLDEAGARSLAEGLRGADFTVDSVED
KPYTRRPAAPFTTSTLQQEAARKLRMSSRVSMQVAQRLYENGYITYMRTDSVNLSQEAVQ
AARRQATELYGADAVPAQPRVYAKRNETAQEAHEAIRPAGDSFRTPAQVKAELRPDEFRL
YELIWKRTVASQMADAKGYTATLRLSATAQDGRLAQFSASGTVITFKGFLDAYEEGRDAE
VDGENAEAKDRRLPQVAQGERLTGDPIEATGHETSPPARYTEASIVAELERREIGRPSTY
APTISTIMDRGYVSKRGTALVPSWTAFAVIGLLEDYFAKYVDYDFTARMEDDLDRIAAGE
LGREAWLQTFYFGAPAAETEKGVEGLKHVVDNLGEIDARAVNSLPITEDITLRVGQYGPY
LERSLPADAEAGATPPRANVPEDLAPDELTPAKAEELFATAQPSERELGTDPETGRTIVA
KDGRYGPYVTEVIPEMTEEELQAWLDAQPTEYYKNGKPKPKKKPAKEKPRTGSLFTSMSV
DTVTLEQALQLMSLPRVVGADAEGEVITAQNGRFGPYLKKGSDSRSLESEDQIFSITQEQ
ALEIYAQPKQRGRGAAKPPLAEFGEDPVSGKKVTVKEGRFGPYITDGVTNITVPRGRRPE
ELTAEEAYQLLADKRAKGPATRGGAKKPAARKAPAKKTTARKKA

NT seq 2835 nt +upstreamnt +downstreamnt
ttgtccacgtcatccgcttccgtgaccgctcccgtgcccgagggcaagaagctggtcatc
gtggagtccccggccaagagcaagtccatcgcgaagtacctcaacgcggtgggctccggc
tgggtggtggactcctccgtggggcacatccgcgacctgcccaagccctcggacctgccg
gcggacatgaagaagggcccgttcgggaagttcgccgtggacacggagcacggcttcacc
ccgtactacgtggtgcacccggacaagaagaagaaggtcgcggagctcaagcgcgagctc
aaggacgccgaggccctctacctcgccacggatgcggaccgggagggcgaggccatcgcc
tggcacctgctggacaccctcaagcccacggtgccggtgtaccggatgaccttcggggag
atcacccaggagggcgtgcgccgaggcctggagaacatccgcgagctggacacggccctc
gtggacgcccaggagacgcgccgcatcctcgaccgcctgttcggctacgagctctcgccg
gtgctgtggcgcaaggtctcccgcgggctctcggcgggccgcgtgcagtcggtggccacc
cgcctcgtcgtcgagcgcgagcgggagcgcatggccttcgtctccgcccactactggggc
gtggagggcaccttcacggtggccgagggcgcgcaggccgcggacgccgtgggcagctcg
ttcacggcccgcctcagcacggtggacggcgagcgcgtggccacgggccgcgacttcgac
gacgccgggcggctcaaggcctccgccggcaagaaggtgacccacctggacgaggccggc
gcccgctcgctggccgagggtctgcgcggggcggacttcacggtcgactcggtggaggac
aagccgtacacccgccgcccggccgcccccttcaccacctccacgctgcaacaggaggcc
gcccgcaagctccgcatgagctcccgcgtctccatgcaggtggcccagcgcctgtacgag
aacggctacatcacgtacatgcgcacggactcggtgaacctctcgcaggaagccgtgcag
gccgcccggcgccaggccaccgagctctacggggcggacgccgtgccggcccagccgcgc
gtctacgccaagcgcaacgagaccgcgcaggaggcccacgaggccatccggcccgcgggg
gactccttccggaccccggcccaggtcaaggccgagctgcgcccggacgagttccgcctg
tacgagctgatctggaagcgcaccgtggcctcgcagatggccgatgccaagggctacacc
gccacgctgcggctctcggccaccgcgcaggacggccgcctcgcgcagttcagcgcctcg
ggcaccgtcatcacgttcaagggcttcctcgacgcgtacgaggagggtcgggacgccgag
gtcgacggcgagaacgcggaggccaaggaccgccgcctgccgcaggtggcccagggcgag
cgcctcaccggtgacccgatcgaggccaccgggcacgagacctccccgccggcccgctac
accgaggcgtcgatcgtcgccgagctggagcgccgcgagatcgggcgtccctccacgtac
gccccgacgatctccacgatcatggaccgcggctacgtgtccaagcgcggcaccgcgctc
gtcccgtcgtggaccgcgttcgcggtgatcggcctgctcgaggactacttcgcgaagtac
gtggactacgacttcacggcccgcatggaggacgacctcgaccggatcgccgcgggcgaa
ctcggccgcgaggcctggctgcagaccttctacttcggggcccccgccgcggagacggag
aagggcgtcgagggcctcaagcacgtggtggacaacctcggcgagatcgacgcgcgggcc
gtgaactcgctgccgatcaccgaggacatcaccctgcgggtgggccagtacggtccgtac
ctggagcggtcgctgccggccgacgcggaggcgggcgccaccccgccgcgcgccaacgtc
cccgaggacctggccccggacgagctcaccccggccaaggccgaggagctgttcgccacc
gcccagccctccgagcgcgagctcggcacggacccggagacgggccggaccatcgtcgcc
aaggacgggcgctacgggccctacgtcaccgaggtcatccccgagatgaccgaggaggag
ctgcaggcctggctcgacgcccagcccaccgagtactacaagaacggcaagcccaagccg
aagaagaagccggccaaggagaagccccgcaccggctccctcttcacgagcatgtccgtg
gacaccgtgaccctcgagcaggcgctgcagctgatgtccctgccgcgcgtcgtgggcgcg
gacgccgagggcgaggtcatcaccgcccagaacggccgcttcgggccctacctgaagaag
ggctcggactcgcgctcgctcgagtccgaggaccagatcttcagcatcacgcaggagcag
gccctcgagatctacgcccagccgaagcagcgtggccgcggggccgccaagccgccgctg
gccgagttcggcgaggacccggtctccggcaagaaggtcactgtgaaggagggccgcttc
ggcccgtacatcacggacggcgtcaccaacatcaccgtcccgcgcggccgccggcccgag
gagctcacggcggaggaggcctaccagctgctcgcggacaagcgcgccaagggcccggcc
acccgcggcggtgccaagaagccggcggcgcgcaaggccccggccaagaagaccaccgcg
cggaagaaggcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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