KEGG   Microbacterium sp. 1.5R: BMW26_10145
Entry
BMW26_10145       CDS       T04912                                 
Name
(GenBank) ribonuclease E/G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
micr  Microbacterium sp. 1.5R
Pathway
micr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:micr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMW26_10145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:micr03019]
    BMW26_10145
   03009 Ribosome biogenesis [BR:micr03009]
    BMW26_10145
Enzymes [BR:micr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BMW26_10145
Messenger RNA biogenesis [BR:micr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BMW26_10145
Ribosome biogenesis [BR:micr03009]
 Prokaryotic type
  rRNA processing factors
   BMW26_10145
SSDB
Motif
Pfam: RNase_E_G Rootletin S1 Imm51
Other DBs
NCBI-ProteinID: APH45273
Position
complement(2120258..2122855)
AA seq 865 aa
MADENNDYDAPTLDFTADADAPAEVVADAPEAEASEAPADGEGSTSETASAEETPAEEAP
AEDAPAEEAPAEDTPAEEAPVEDAPAEDAPAEDAPAEDAPAAEAPSQDAPDAAAEKPAVE
AAPEQPAAEKPAAEKPAAEKPAAETAPEKPEEPKPLTAVSLGLLPEVFVSQVSTQLHFYA
PEVLPLPARTGRERVFDRIADREQDEPAGRRGRRRRGGSDDLDTRDQREPREQREEPRQP
RQRVVEYITEPKAIKGSTRLEAKKQRRRDGRDAGRRRPVVTEAEFLARRESVDRKMVVRS
KNGRTQIGVLEDGVLVEHYVARNQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLY
SGEVDWDGVETGNQPRRIELALKAGDRVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPG
GSMNGISRKLPDNERTRLKRILKEVLPESSGVIVRTAAEGATEDQLTRDVQRLTSQWEHI
RKQVENQQAPALLHAEPDLLVKIVRDVFNEDFTKMLIQGEDAQRTIRAYLESVAPDLLER
VESYEDETDPFDAFRITEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGN
LEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLIECLSRDRTKH
QVAEVTSLGLVQMTRKKLGLGLLETFSEACDVCAGRGVIVHHDPVVKHRSSSNGNGNGNG
NGSSQSNRRQRGGNGQSQSAAPAAVTTHSIPEGAKSALAQIAASTRTPNADEPAEAVAPV
AEPTEATAPQERAKKPRKKRGSDRKSSPKSPAEALLDSVLDALPEPKAPGQGRGRRRVST
AALTGTPVSVNSEPSAPVASGDSES
NT seq 2598 nt   +upstreamnt  +downstreamnt
atggccgatgagaacaatgactacgacgcccctaccctcgacttcactgcggatgctgac
gcgcccgcagaggtagtcgccgacgctccggaggctgaagcatccgaagctccggccgac
ggtgagggttcgacgagcgagaccgcctcggccgaggagactcctgctgaggaggctccc
gctgaggatgctcctgctgaggaggctcccgctgaggacactcctgctgaagaggctccc
gtcgaggatgccccggcagaggatgccccggcagaggatgccccggctgaggatgccccg
gctgcggaggctccgtcgcaggacgcgcccgacgccgctgcagagaagcccgctgtcgaa
gccgcacccgagcagcccgctgccgagaagcccgctgccgagaagcccgctgccgagaag
cccgctgccgagaccgcacccgagaagccggaggagcccaagcccctcaccgccgtctcg
ctggggctgctccccgaggtcttcgtctcgcaggtctcgacccagctgcacttctacgca
cccgaggtcctgccgcttcctgcgcgcacgggtcgcgagcgtgtgttcgaccgcatcgcc
gaccgcgagcaggacgagccggccggtcgccgcggccgtcgtcgtcgcggcggttcggac
gacctcgacactcgcgatcagcgtgagccgcgggagcagcgcgaggaaccgcgccagccc
cgtcagcgcgtcgtggagtacatcaccgagccgaaggccatcaagggctccacgcgcctg
gaggcgaagaagcagcgccgccgcgacggacgtgacgcaggtcgtcgtcgcccggtcgtg
accgaggcggagttcctcgcgcgtcgcgagtcggtcgaccgcaagatggtcgtccgctcc
aagaacggccgcacgcagatcggcgtcctcgaagacggcgtgctcgtcgagcactacgtc
gctcgcaaccaggacgcatcgctgatcggcaacgtctacctcggtcgcgtgcagaacgtg
ctgccgagcatggaggcagcgttcgtcgacatcggccgcggccgcaacgccgtgctgtac
tccggtgaggtcgactgggacggcgtcgagaccggcaaccagccgcgtcgcatcgagctc
gcgctgaaggcgggcgaccgcgtcctcgtgcaggtcaccaaggatccggtgggccacaag
ggcgcgcgtctgaccagccagatctcgctcccgggccgctacctcgtgtacgtgccgggc
ggatcgatgaacggcatcagccgcaagcttcccgacaacgagcgcacgcgcctgaagcgc
atcctcaaggaggtcctgcccgaatcctccggcgtgatcgtccgcacggcggccgaaggc
gccaccgaggaccagctcacgcgtgacgtccagcggctcaccagtcagtgggagcacatc
cgcaagcaggtcgagaaccagcaggcacccgcactgctgcacgccgagcccgacctcctc
gtcaagatcgtccgcgacgtcttcaacgaggacttcacgaagatgctcatccagggcgag
gacgcgcagcgcacgatccgcgcctacctcgagagcgtcgcacccgacctcctcgagcgc
gtcgagtcgtatgaggacgagaccgacccgttcgacgctttccggatcacggagcagatc
gagaaggcgctcgaccgcaaggtgtggctgccctcgggtggttcgctggtcatcgaccgc
accgaggcgatgaccgtcgtcgacgtgaacaccggcaagttcgtcggctcgggcggaaac
ctcgaggagaccgtcaccaagaacaacctcgaggcggccgaggagatcgtccgccagctg
aggctgcgtgacatcggcggcatcatcgtcgtcgacttcatcgacatggtgctcgagtcc
aatcgcgacctggttctgcgtcgcctgatcgagtgcctcagccgggaccggacgaagcac
caggtcgccgaggtcacctcgctcggcctcgtgcagatgacccgcaagaagctgggcctc
ggcctgctcgagacgttcagcgaggcgtgcgacgtatgcgccggccgcggcgtcatcgtc
caccacgaccccgtcgtcaagcaccgctccagcagcaacgggaacggcaacggcaacggg
aacggcagctctcagtccaaccgtcgccagcgcggcggcaacggtcagtcgcagagcgct
gctccggccgcggtgacgacgcacagcatccccgagggagcgaagtcggcactcgcgcag
atcgcagcctcgacgcgcactccgaatgccgacgagccggcagaggccgtcgctcccgtg
gctgagccgacggaagcgaccgcaccgcaggagcgcgccaagaagcctcgcaagaagcgt
ggatccgaccgcaagtcgtcgccgaagtccccggcggaggcgctgctcgattcggtgctc
gatgctcttcccgagccgaaggcgcccggtcagggtcgcggtcgtcgccgcgtctcgacg
gctgccctcacaggcacgcccgtctcggtgaactccgagccgtcagcgccggtcgcgagc
ggggattcggagtcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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