KEGG   Microbacterium sp. 1.5R: BMW26_12235
Entry
BMW26_12235       CDS       T04912                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
micr  Microbacterium sp. 1.5R
Pathway
micr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:micr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMW26_12235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:micr03019]
    BMW26_12235
   03110 Chaperones and folding catalysts [BR:micr03110]
    BMW26_12235
   03029 Mitochondrial biogenesis [BR:micr03029]
    BMW26_12235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:micr04147]
    BMW26_12235
Enzymes [BR:micr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BMW26_12235
Messenger RNA biogenesis [BR:micr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BMW26_12235
Chaperones and folding catalysts [BR:micr03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BMW26_12235
Mitochondrial biogenesis [BR:micr03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BMW26_12235
Exosome [BR:micr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BMW26_12235
  Exosomal proteins of other body fluids (saliva and urine)
   BMW26_12235
  Exosomal proteins of breast cancer cells
   BMW26_12235
  Exosomal proteins of colorectal cancer cells
   BMW26_12235
  Exosomal proteins of bladder cancer cells
   BMW26_12235
SSDB
Motif
Pfam: Cpn60_TCP1 CbiA
Other DBs
NCBI-ProteinID: APH45631
Position
complement(2553201..2554820)
AA seq 539 aa
MAKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAITEELLASAKEIDSKEQIAATASISAADPAIGELIAEAIDKVGKEGVVTVEESQT
FGTELELTEGMRFDKGYLNPYFVTDPERQEAVFEDAYILIANQKISNIKDLLPIVDKVIQ
DGKELVIIAEDVEGEALATLVLNKLKGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIT
EEVGLKLENATLDLLGRARKVIVTKDETTIVEGAGEADQIEGRVTQIRREIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQS
GTKALDALSLSGDEATGANIVRVAIEAPLKQIALNAGLEPGVVANKVSELPSGQGLNAAT
GEYVDMFAAGIIDPAKVTRSALQNAASIAALFLTTEVVVADKPEKAPAPMGDPSGGMDF
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcaaagatcatcgctttcgatgaggaggcccgccgcggcctcgagcgcggcctcaac
attctcgccgacgccgtcaaggtgacgctcggcccgcgcggtcgcaacgtcgtgctggag
aagaagtggggcgcccccacgatcacgaacgacggcgtctccatcgccaaggagatcgag
ctcgacgacccgtacgagaagatcggtgcggagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggaaccaccaccgccacggtgctcgcccaggctctggtccgc
gagggtctgcgcaacgtcgcagccggcgcagacccgatctcgctgaagcgcggcatcgag
aaggccgtcgcggccatcaccgaggagctcctcgccagcgcgaaggagatcgactccaag
gagcagatcgctgcgaccgcttcgatctcggctgctgaccccgccatcggcgagctcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtcgtcaccgtcgaggagtcgcagacc
ttcggcaccgagctcgagctcaccgagggcatgcggttcgacaagggctacctgaacccg
tacttcgtgacggacccggagcgccaggaggctgtcttcgaagacgcctacatcctcatc
gcgaaccagaagatctcgaacatcaaggaccttctgcccatcgtcgacaaggtgatccag
gacggcaaggagctcgtcatcatcgccgaggacgtcgagggcgaggctctcgcgactctc
gtgctcaacaagctcaagggcatcttcaagtcggtcgccgtcaaggcacccggcttcggc
gaccgccgcaaggcgcagctgcaggacatcgcgatcctcaccggtggtcaggtcatcacc
gaagaggtcggcctgaagctcgagaacgccacgctcgacctgctgggtcgcgctcgcaag
gtcatcgtcaccaaggacgagaccacgatcgtcgagggtgccggagaggcagaccagatc
gagggtcgcgtcacgcagatccgtcgcgagatcgagaacaccgacagcgactacgaccgc
gagaagctgcaggagcgcctcgccaagcttgcaggtggcgtcgccgtcatcaaggcgggc
gcggcaaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcagccgtcgaggagggcatcgtccccggtggtggcgtcgcgctgatccagtcc
ggcaccaaggctctcgacgctctctcgctctcgggcgacgaggcgaccggtgcgaacatc
gttcgcgtcgcgatcgaggctccgctgaagcagatcgccctcaacgccggcctcgagccg
ggtgtggtcgcgaacaaggtctccgagcttccctcgggtcagggcctcaacgcggctacc
ggtgagtacgtcgacatgttcgcagcgggcatcatcgacccggcgaaggtgacccgctcg
gcgctgcagaacgcagcatcgatcgcggctctcttcctcaccaccgaggtcgtcgtggct
gacaagcccgagaaggctccggccccgatgggtgacccgtctggtggcatggacttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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