KEGG   Microbulbifer sp. THAF38: FIU95_08735
Entry
FIU95_08735       CDS       T06274                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mict  Microbulbifer sp. THAF38
Brite
KEGG Orthology (KO) [BR:mict00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mict03032]
    FIU95_08735 (topA)
   03400 DNA repair and recombination proteins [BR:mict03400]
    FIU95_08735 (topA)
Enzymes [BR:mict01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FIU95_08735 (topA)
DNA replication proteins [BR:mict03032]
 Prokaryotic type
  DNA Topoisomerases
   FIU95_08735 (topA)
DNA repair and recombination proteins [BR:mict03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FIU95_08735 (topA)
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom
Other DBs
NCBI-ProteinID: QFT54635
UniProt: A0A5P9EVM8
Position
1972265..1974949
AA seq 894 aa
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPTGGGNKQPVDAKERARRAAETR
KLSPEAKEVYKRKKNREQLIKRMGIDPDNGWQAHYEILPGKEKVVSELQKLAENADHIYL
ATDLDREGEAIAWHLREAIGGNDDRYRRVVFNEITKSAIQEAFKDPGRLNINRVHAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADTAT
NKANKLRLEVKKQAGEAFRPTNEVDAKSAVKLLQGSDFVVSARDDKPTSSKPGAPFITST
LQQAASNRLGFSVKKTMTLAQRLYEAGHITYMRTDSTNLSKEAVESARQYIGENFGDKYL
PENPNSYSSKEGAQEAHEAIRPSDVRVAPNMLSGMERDAERLYNLIWQQFVACQMTPAKY
TSTSIVVSAGEFELRARGRVIRFDGFLKVAPPAGKKDEDLVLPDVKVGEKLSLEQLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFKNLMDYGFTANLEESLDAVADGDKGWKQLLDEFYQDFSSRLEKAQSSDAGMRRN
TPTDTDIECSKCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVSGDEAIDADKDED
AETRQLREKRRCPKCGTAMDSYLLDEHRKLHICGNNPDCNGYEVEQGTFKIKGYDGPIIE
CDKCGSDMQLKSGRFGKYFGCTNEACKNTRKLLKNGQPAPPKMDPVPMPELACQKVEDHY
ILRDGASGLFLAASQFPKNRETRAPLVKELLPHQSEIDPKYSFLFSAPAQDDQGRDTVVR
FSRKTQEQYVQSEEDGKATGWKAFYRDGAWKVEAASKSTAAKKKPAAKKVAAKK
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgggtaaatcactggtcatcgtcgaatcgccggccaaagcgaaaactatcaataaatat
ctcggcaaggactttgtggttaagtccagcgtcggtcatattcgcgatttgccaactggt
ggcggcaacaaacagcccgttgatgcaaaagagcgggcaagacgtgcggctgagacccgt
aaactttcccctgaggcgaaagaggtctacaagcgtaagaaaaatcgtgagcaactgatc
aagcgcatgggtatcgacccagataatggctggcaggctcactatgaaatcctaccgggt
aaagagaaggtggtcagcgagttgcagaaacttgccgagaatgccgaccacatttacctg
gcaacggacttggaccgcgagggagaggccatcgcctggcacttgcgcgaagccattggt
ggcaatgatgatcgttatcgccgggtagttttcaatgagattaccaaatcggcaattcag
gaggctttcaaagaccccggccgcctgaatatcaatcgggttcatgctcagcaggcccgt
cgttttctcgatcgcatcgtgggctatatggtgtccccgctgttgtgggaaaaggttgcc
cgcggcctttccgccggtcgggtgcaatcggtagccgtgcgattggtggttgagcgcgag
cgtgaaattcgcgcctttatcccggaagagtactggacgctcttcgccgataccgccaca
aacaaagcgaacaagctccgccttgaagttaaaaagcaggctggagaagctttccgccct
accaatgaagtcgatgcgaaaagcgcggttaaattgttgcagggcagtgattttgttgtc
agtgctcgtgatgacaaacctacgagttccaagccaggggccccttttattacttcgacg
ctacagcaggcggcaagcaatcgccttggctttagtgttaagaaaactatgaccctagcg
cagcgcctctacgaagctggtcatatcacatacatgcgtaccgattcgactaatttgagt
aaagaggcggttgagtcggcccggcaatatatcggtgagaatttcggcgataagtatttg
ccggaaaatcccaatagctatagcagcaaagagggggcacaagaagcgcacgaggcaata
cgcccctccgatgtccgtgtcgcccctaatatgctttccggtatggagcgcgatgcagag
cggctctacaacctgatttggcaacagtttgttgcctgtcaaatgaccccggcgaaatac
acttcaacctctattgtggtgagcgctggtgaatttgagttgcgtgctcgcggtcgggtg
attcgctttgatggctttctcaaggtcgcgcctccggcaggtaaaaaagatgaggatcta
gtgctgcctgatgtgaaggtgggtgaaaagctctcactagagcagctagacccgaaacag
cactttacgaaaccaccagctcgcttcagtgaagcagccctggtaaaagagctggagaag
cgcggtattggccgaccctcaacctatgcctcgatcatttccactattcaggatcgtggc
tatgtgcggctagagaaccgccgtttttatgcggaaaaaatgggtgatattgtcaccgac
cgtctcagtgaaagttttaaaaacctgatggactacggttttaccgcaaacctggaggaa
tccctggatgcggtcgccgacggcgataaaggttggaagcagctgcttgatgagttttat
caggacttctcttcgcgactggaaaaggctcagtccagcgatgcgggaatgcgtcgcaac
acgccgacggataccgatattgaatgcagtaagtgcggtcgccatatgcagattcgtacg
ggttctaccggtgttttcctgggttgctccggttatgcgctgcctcccaaggagcgttgc
accaatacaatgaatctggtttccggtgatgaggcgatagacgcagataaggatgaggat
gcagaaacccgtcagctgcgggagaagcgccgttgtcccaagtgcggcacggcgatggat
agctatctgctcgatgagcatcgcaaactgcatatctgtggtaacaatccggactgtaat
ggatacgaggtggagcagggcacgttcaaaatcaagggttatgacggcccgattattgag
tgtgataaatgcggaagcgatatgcagctgaagtctggccgctttggtaaatattttggc
tgcactaatgaagcttgcaagaacacccgtaagctgttgaagaatggccagccggcacca
ccgaagatggatccggtgcccatgcctgagttggcatgccagaaggttgaagaccattac
attcttcgtgatggcgcctccgggttattcctggctgccagtcagttcccgaaaaaccgt
gaaacccgcgcaccgctggtcaaagagttgctacctcaccaaagtgagatcgatcccaag
tacagtttcttgttctctgcacctgcacaggatgatcaggggcgggataccgtggttcgc
tttagtcgcaagacccaagagcaatatgtccagtccgaggaggatggaaaggcgacgggt
tggaaggctttctatcgagatggcgcctggaaggttgaggcggcaagtaagtctactgca
gctaagaaaaagcctgcagcgaagaaagtggcggcaaaaaagtaa

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