KEGG T04827: BJP65

Microbacterium sp. BH-3-3-3: BJP65_10070

Entry

BJP65_10070       CDS       T04827

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

mih Microbacterium sp. BH-3-3-3

Pathway

mih03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:mih00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJP65_10070
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mih03400]
    BJP65_10070
Enzymes [BR:mih01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BJP65_10070
DNA repair and recombination proteins [BR:mih03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BJP65_10070

SSDB

Motif

Pfam:

Exo_endo_phos

Other DBs

NCBI-ProteinID:

AOX46111

Position

complement(2175789..2176634)

AA seq 281 aa
MRLATWNVNSIRARVTRTVEFCVREHIDVLAMQEIKCKTEQFPYAAFEEAGYHVAAHGLN
QWNGVAIASREPLEDVEIGFPGMPGFEKGKEGPDLPQEARAIGATVGGVRVWSLYVPNGR
GLDDPHFTYKLDWLDKLRQYTADTLAGDPDLPLALTGDFNIAPTDADNGDPTIVQGASTH
VSPAERAAFAAFETAGLTDVVRPLLPTGYTYWDYKQLRFPRNEGLRIDFILGSRAFADAV
QGAEIHRNERKGEVPSDHVPVVADLDLSGADDDDDLPMIFG

NT seq 846 nt +upstreamnt +downstreamnt
atgcgcctggccacctggaacgtcaactccatccgcgcccgcgtcacccgcaccgtcgag
ttctgcgtgcgcgagcacatcgacgtgctggcgatgcaggagatcaagtgcaagaccgag
cagttcccctacgccgcgttcgaagaggcggggtatcacgtcgccgcacacggcctgaac
cagtggaacggcgtcgcgatcgccagtcgcgagcccctcgaggacgtcgagatcggattc
cccggcatgcccggtttcgagaagggcaaagagggccccgatcttccccaggaagcccgg
gccatcggtgcgaccgtgggcggcgtgcgcgtctggagcctgtacgtgcccaacgggcgc
gggctcgacgacccgcacttcacgtacaagctcgactggctcgacaagctccggcagtac
accgccgacaccctcgcgggcgaccccgacctgcccctcgcgctgacgggcgacttcaac
atcgcgcccaccgatgccgacaacggcgacccgacgatcgtgcagggcgcgagcacgcac
gtctctcccgccgagcgggcggcgttcgccgccttcgagacggccggactcaccgacgtc
gtgcggcccctccttcccaccggttacacctactgggactacaagcagctgcgcttcccc
cgcaacgaggggctccgcatcgacttcatcctcggctcgcgggccttcgccgacgccgtg
cagggcgccgagatccaccgcaacgaacgcaagggcgaggttccgagcgatcacgttccc
gtggtggccgacctcgacctctcgggcgccgacgatgacgacgacctgccgatgatcttc
ggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF

DBGET integrated database retrieval system