KEGG   Microbulbifer sp. A4B17: BTJ40_02650
Entry
BTJ40_02650       CDS       T05421                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mii  Microbulbifer sp. A4B17
Pathway
mii03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BTJ40_02650 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mii03021]
    BTJ40_02650 (rpoB)
   03400 DNA repair and recombination proteins [BR:mii03400]
    BTJ40_02650 (rpoB)
Enzymes [BR:mii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BTJ40_02650 (rpoB)
Transcription machinery [BR:mii03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BTJ40_02650 (rpoB)
DNA repair and recombination proteins [BR:mii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BTJ40_02650 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RnfC_N 7TMR-HDED
Other DBs
NCBI-ProteinID: AWF79801
UniProt: A0A2S1JN07
Position
593662..597735
AA seq 1357 aa
MAYSYTEKKRIRKDFGKLPKVMDVPFLLAIQLDSYRNFTQADKRPDDRMDVGLQAAFKSV
FPIVSYSGNAALEYVSYTLGKPAFDVKECTLRGVTYACPLRVRVRLIIYDKESANKSIKD
IKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLYAARV
IPYRGSWLDFEFDPKDLVFVRIDRRRKLPATILLRALGYTSQEMLEMFFETSTFELLEDR
VSLELIPSRLRGDVASFDIKDGQGKVIVEEGRRITPRHIRQLEKAGVEKLEAPLEYLFGR
VLANDIIDESTGEIAIDCNTEITDEVIAKLRVLNVKSFQTLYTNDLDRGPFISDTLRAEP
SRTVLEALVEIYRMMRPGEPPTKESAEALFENLFFTDERYDLSAVGRMKFNRRLGREDET
GPGTLSKEDIVEVLKTLIDIRNGQGMVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARANHYGFLESAYRKVV
DGKVTDEIAYLSAINEANFIIAQASAEVDDNGNFVDDLISVRHQGEFTLKAPGEIQYMDV
SAKQVVSVAAAMIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERTVARDSGVC
VVAKRGGIIERVDSSRVVVRVADAEVEAGDAGVDIYNLTKYIRSNQNTCINQRPIVNTGD
RVVRGDILADGPSVDLGELALGQNMRIAFMPWNGYNFEDSILISERVVQEDRFTTIHIQE
LTCIARDTKLGSEEITADIPNVGESALNKLDESGIVYIGAEVGAGDILVGKVTPKGEAQL
TPEEKLLRAIFGEKASDVKDTSLRAPSGTRGTVIDVQVFTRDGLQKDQRSLDIEKSQLDE
VRKDLNEEYRIVEGATFERLQQALLGQKAAGGKGVKKGDEMTAEVLTALPREDWFKLRME
DDSLNDQLEKAEAQLKERRKLLDEAFEDKKKKLESGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVISVIKPVEDMPYDQNGEPVDIVLNPLGVPSRMNVGQVLEMHLGMAAKG
LGVKVDKMIKEQQEIAKVRGFLEEVYNSTGGRKEELDEFSDEEVMTMAQNLRRGVPMATP
VFDGADESEIKQLLRLADIPDSGQITLHDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGRTKMY
KNIVDSDHRMEPGMPESFNVLVKEIRSLGMNFELEHE
NT seq 4074 nt   +upstreamnt  +downstreamnt
atggcttactcatatactgagaaaaaacgtatccgcaaggattttggcaaactgcctaag
gtcatggatgtgccctttctgcttgcgatacagctcgattcttatcgcaactttacacag
gccgacaagcgccccgacgaccgtatggacgttggcctgcaagcggcgtttaaatctgta
tttccgattgtcagctattccggcaatgccgccctggagtacgtaagttatacgctgggt
aagcccgcttttgacgttaaggaatgtaccctgcgcggcgttacctatgcatgtccgctg
cgcgtgcgcgtgcgtctgattatttacgataaagaatctgcgaataagtccattaaggac
attaaagagcaggaagtctacatgggcgagattccgctcatgaccgacaacggtaccttc
gtaatcaatggtaccgagcgtgttatcgtatcccagctgcaccgttccccgggtgtattc
ttcgatcacgacaaaggcaagactcactcttccggtaagctgttgtacgccgcgcgtgtc
atcccctaccgtggctcatggctggatttcgagttcgatccgaaagacctggtattcgtg
cgtatcgaccgccgccgtaaattgcctgcgactattctgctgcgcgccctgggttacacc
tcccaggaaatgctggaaatgttcttcgagaccagcacctttgagctgttggaagaccgt
gtcagcctggagctgattccgtctcgcctgcgcggtgatgttgcttcttttgacatcaaa
gacggccagggcaaggtgattgtcgaagagggtcgccgtattaccccgcgtcatatccgt
cagttggaaaaggccggcgtagaaaagctggaagcaccgcttgagtacctgtttggccgt
gtactggcgaacgacatcatcgatgagtccaccggtgagatcgcgatcgactgtaatacc
gagattactgatgaagtaatcgccaagctgcgtgtactgaacgttaagagtttccaaacg
ctgtacaccaacgatctggatcgcggtccgtttatctccgacaccctgcgtgcagagccg
tctcgcactgtgttggaagcgctggtagagatctaccgtatgatgcgcccgggcgaaccg
cccaccaaggagtccgcagaagcgctgttcgagaacttgttctttaccgacgagcgttac
gacctgtccgctgttggccgcatgaagttcaaccgtcgcctgggtcgggaagacgagact
ggccccggcactctgagtaaagaagatatcgtcgaagttctgaagactctgatcgatatc
cgcaacggtcagggcatggtcgacgatatcgatcacctgggtaaccgtcgcgtgcgttcc
gtaggcgaaatggctgaaaaccagttccgcgttggtctggtacgtgtagagcgcgctgtt
aaagagcgtctgtccatggcggagtccgaaggcctgatgcctcaggacctgatcaatgcc
aagccggttgccgctgccgtgaaggaattcttcggttcctcgcagctgtcccagtttatg
gaccagaacaacccgctgtcggaagtgactcacaagcgtcgtgtttccgccctcggcccg
ggtggtttgacccgtgagcgcgctggctttgaggtgcgcgacgtacacccgactcactac
ggccgcgtatgtccgattgagacgccggaaggaccgaacatcggtctgattaactccctg
gctacttacgcccgcgccaaccattacggtttcctcgagagcgcctaccgcaaagtggtt
gacggcaaggtaactgatgaaattgcgtacctgtccgcgatcaatgaagccaacttcatt
attgcccaggcgtctgcggaagtagacgacaacggtaactttgttgatgacctgatcagc
gtgcgtcaccagggcgaatttaccctgaaagcaccgggcgaaatccagtatatggatgtt
tccgccaagcaggtggtttccgtagctgcggcgatgattccattccttgagcacgatgac
gccaaccgtgcattgatgggatcgaacatgcaacgtcaggcggtaccgaccctgcgcgct
gaaaagccgctggtgggcaccggtatggagcgcactgtagcgcgcgactccggcgtgtgt
gtggttgccaagcgcggcggcattattgagcgcgttgactccagccgtgtggttgttcgc
gtggccgacgctgaggtggaagccggtgatgcaggtgtggatatctacaacctgaccaaa
tacatccgctccaaccagaatacctgtatcaaccagcgcccgatcgttaatactggcgat
cgtgtagtccgtggcgatatcctcgccgatggtccctctgtagacctgggtgagctggct
ctgggccagaatatgcgtatcgcatttatgccctggaatggttacaactttgaggactcc
atcctcatcagtgaacgcgttgtacaggaagaccgcttcaccactattcacattcaggag
ctgacctgtattgcccgtgataccaagctgggcagtgaagaaattactgcggatattccc
aatgtgggcgaatctgcgctgaataagctggacgagtccggcatcgtatacatcggcgca
gaagtaggcgctggcgatatcctggtcggtaaggtcactccgaagggcgaagcccagctg
actccggaagaaaaactgctgcgcgcgatcttcggggagaaagcttccgacgttaaagac
acctctctgcgcgcgcccagtggcactcgcggtacagtgatcgacgttcaggtatttacc
cgcgacggcctgcagaaagaccagcgctccctcgatattgagaagtcacagctggacgag
gtccgcaaggatctgaacgaggaatatcgcattgtagaaggtgcgaccttcgagcgtctg
caacaagctctgctgggccaaaaggccgccggtggcaagggcgttaagaagggcgatgag
atgaccgctgaagtcctcaccgctctgccgcgcgaagactggttcaagctgcgtatggaa
gacgacagcctgaacgaccagctggaaaaagcggaagctcagctgaaagagcgtcgcaag
ctgcttgacgaagccttcgaagacaagaagaagaaactggagtccggcgatgatctggct
ccgggcgtgctgaaaatcgtcaaggtttacctggcgatcaaacgccgcatccagccgggc
gacaagatggccggtcgtcacggtaacaagggtgttatctccgtaatcaagcctgttgag
gacatgccttatgaccaaaacggtgagccggtagatatcgtcctgaacccgctgggcgtt
ccctcgcggatgaacgttggtcaggttctggaaatgcacttgggcatggccgctaaaggc
ctcggcgttaaagtcgacaagatgatcaaggagcagcaggaaatcgccaaggtgcgcgga
ttcctggaagaggtctacaactccactggcggacgcaaggaagaactcgacgagttctcc
gatgaggaagtcatgaccatggcgcaaaacctgcgtcgcggtgtacctatggcgaccccg
gtatttgacggtgccgatgaaagtgagatcaagcagctgctgcgtcttgccgatatcccg
gattccggtcagatcaccctgcacgacggccgtaccggcgatgctttcgagcgtccggta
actgtgggctacatgtacatgctgaagctgaaccacttggtagacgacaagatgcacgcg
cgttctaccggttcctacagcctggttacccagcagccgctgggtggtaaagcccagttc
ggtggtcagcgcttcggggagatggaagtgtgggcgctggaagcttacggcgctgcatac
accctgcaggaaatgctcacggttaaatccgatgacgtggaaggtcgtaccaagatgtac
aagaacatcgtggactccgaccaccgtatggagccgggcatgccggaatccttcaacgta
ctggttaaggaaatccgctctctcggtatgaacttcgagcttgagcacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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