KEGG   Micromonospora sp. L5: ML5_0589
Entry
ML5_0589          CDS       T01379                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mil  Micromonospora sp. L5
Pathway
mil03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ML5_0589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mil03021]
    ML5_0589
   03400 DNA repair and recombination proteins [BR:mil03400]
    ML5_0589
Enzymes [BR:mil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ML5_0589
Transcription machinery [BR:mil03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ML5_0589
DNA repair and recombination proteins [BR:mil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ML5_0589
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: ADU06139
Position
complement(611912..612934)
AA seq 340 aa
MLISQRPSLSEESINETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTIPGVKEDVVELVMNIKELCVSSEHDEPVSMYLRKQGPGDVTAGDIQPPAGVSVHN
PDLKLATLNGKGRLDMELTVERGRGYVTAAQNKQAGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDRLIIDVETKPSMGPRTALASAGSTLVELFGLARELDETAEGIDIGPSPQD
AQLAADLALPIEELDLTVRSYNCLKREGINSVGELIGRTEADLLDIRNFGQKSIDEVKMK
LAGMGLGLKDSAPNFDPAHVVDAFGEADYDTDDYRETEQL
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgctcatcagccagcgaccgtctctctccgaagagtcgatcaacgagacccgctcccgg
ttcaccatcgagccgctggagcccggcttcggctacacgctgggcaactcgctgcggcgt
acgctgctgtcctcgatcccgggtgcggcggtcacctcgatcaagatcgacggtgtgctg
cacgagttcaccacgatccccggtgtcaaggaggacgtggtcgagctcgtcatgaacatc
aaggagctgtgcgtcagctccgagcacgacgagccggtcagcatgtacctgcgcaagcag
ggcccgggcgatgtgaccgccggtgacatccagcccccggccggtgtctcggtgcacaac
ccggacctgaagctcgccaccctcaacggcaagggccggctcgacatggagctgaccgtc
gagcggggtcgcggctacgtcaccgcggcgcagaacaagcaggcgggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacgtaccgggtcgaggcg
acccgtgtcgagcagcggaccgacttcgaccggctcatcatcgacgtcgagaccaagccg
tcgatgggcccgcgtaccgcgctggcctcggccggttcgacgctggtggagctgttcggg
ctggcccgggagctggacgagaccgccgagggcatcgacatcgggccgtccccgcaggac
gcccagctggcggcggacctggccctgccgatcgaggagctggacctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatcaactccgttggtgagctcatcgggcgtaccgag
gccgacctcctcgacatccgcaacttcggtcagaagtcgatcgacgaggtcaagatgaag
ctcgccgggatgggcctggggctgaaggactcggctccgaacttcgacccggcgcacgtc
gtggacgccttcggcgaggcggactacgacaccgacgactaccgcgagaccgagcagctc
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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