KEGG   Microbacterium sp. No. 7: AOA12_11125
Entry
AOA12_11125       CDS       T04102                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mio  Microbacterium sp. No. 7
Brite
KEGG Orthology (KO) [BR:mio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mio03016]
    AOA12_11125
Enzymes [BR:mio01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AOA12_11125
Transfer RNA biogenesis [BR:mio03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AOA12_11125
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ALJ20426
UniProt: A0A0P0DKK5
Position
2364796..2365992
AA seq 398 aa
MAEYQVIADLTGAREAAEALASGTGPVAVDVERASGFRYSQRAYLIQLYRRGSGVFLLDP
PAIGDFSSVQDAIGAEEWVLHAASQDLPSLREDGLDPSRIFDTELAARLLGHERVGLGAV
VEHTLGISLAKAHSAADWSTRPLPADWLEYAALDVLHLVDVRDALAAELAEQGKTEWAAE
EFEATRTRPVKPAREEPWRRLSGLHAIRGRRALSVARSLWTAREDFAREQDIAPGRLVPD
RSIVAAVRADPATKQDLAALKEFHGRASRSQLDRWWAAIEAGRRETRPPVERVPSDAPPP
PRAWADRNPEADARLKAARPVIENLAIELRMPVENLLTPDSLRRVAWSPPEPLTVASVSE
ALAALGARGWQIAQTAPSIVDAFVASTQSTAHGDDTGS
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggctgaataccaggtcatcgcggatctcacgggagcacgcgaggccgccgaggccctc
gcctcgggaaccggccccgtcgccgtcgacgtcgagcgcgcgtcgggcttccgctactcg
cagcgcgcctatctcatccagctgtaccgccgcggctccggcgtgttcctgctcgacccg
cccgcgatcggcgacttctcgtcggtgcaggacgcgatcggcgcggaggaatgggtcctg
cacgccgccagccaggacctgccgtcgctgcgcgaggacggcctcgacccttcccggatc
ttcgacaccgagctcgcggcgcgcctgctcggccacgagcgcgtcggcctcggcgccgtc
gtcgagcacacgctgggcatcagcctcgccaaggcgcactcggccgccgactggtcgacc
cgcccgctccccgccgactggctggagtacgcggccctcgacgtgctgcacctcgtcgac
gtgcgcgacgccctcgcggccgagctcgccgagcagggcaagacggagtgggccgccgag
gagttcgaggcgacgcgcacccggcccgtcaagccggcgcgcgaggagccctggcggcgc
ctgagcggcctgcacgcgatccgcggccggcgcgcgctctcggtcgcacggtcgctgtgg
acggcgcgcgaggacttcgcgcgcgagcaggacatcgcgccggggcggctggtgcccgac
cggtcgatcgtcgccgcggtgcgcgccgaccccgcgacgaagcaggacctcgcggcgctc
aaggagttccacggccgcgcgagccgcagccagctcgaccgctggtgggccgcgatcgag
gcggggcgccgcgagacgcggccgcccgtcgagcgcgtcccgagcgacgcgccgcccccg
ccgcgggcgtgggccgatcgcaaccccgaggccgacgcacggctcaaggccgcgcgtccc
gtgatcgagaacctcgcgatcgagctgcggatgccggtcgagaacctgctgacccccgac
tcgctgcgccgcgtcgcgtggagcccgccggagccgctcaccgtggcatccgtctcggag
gcgctcgccgcgctcggcgcgcgcggctggcagatcgcgcagaccgcgccctcgatcgtc
gatgcctttgtagcatcgactcaatccacggcccacggcgacgacacgggttcatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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