KEGG T04312: AXH82

Microbacterium sp. PAMC 28756: AXH82_16755

Entry

AXH82_16755       CDS       T04312

Name

(GenBank) RNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

mip Microbacterium sp. PAMC 28756

Brite

KEGG Orthology (KO) [BR:mip00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mip03009]
    AXH82_16755
Enzymes [BR:mip01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     AXH82_16755
Ribosome biogenesis [BR:mip03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AXH82_16755

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AMG84871

Position

complement(3501495..3502415)

AA seq 306 aa
MESRSLPVPDGLDGTRVDAALAKLLGFSRTFAAEVAASGGVRLDGVTLDKSDRLRGGAWI
DVEWEPKEGPKIVPIAVPELGIVYDDDDIVVVDKPTGVAAHPSLGWEGPTVVGALAAAGF
RVATSGAPERQGVVHRLDVGTSGLMVVAKSEAAYTALKRAFKERTVEKIYHAVVQGHPDP
LVGTIDAPIGRHPNHSWKFAVVPDGKPSVTHYETLEAFPGASLLEIHLETGRTHQIRVHM
AAHRHPCVGDPLYGADPTLSARLGLTRQWLHAHQLAFAHPTTGEWVQFASPYPEDFQHAL
DVLRGE

NT seq 921 nt +upstreamnt +downstreamnt
gtggagtcccgctcgctgcccgtcccggacgggctcgacggcacgcgggtcgacgccgcc
ctcgccaagctcctcgggttctcgaggaccttcgcggcggaggtggccgcgtccggcggc
gtccgcctggacggcgtcaccctcgacaagtcggaccgcctgcggggcggtgcctggatc
gatgtcgagtgggagccgaaggaggggccgaagatcgtccccatcgcggtgcctgagctg
ggcatcgtctacgacgacgacgacatcgtcgtcgtcgacaagccgacgggcgtcgccgcc
cacccctcgctcgggtgggagggccccacggtcgtcggtgccctcgccgccgcggggttc
cgcgtcgcgaccagcggtgcaccggagcgtcaaggcgtcgtgcaccggctggatgtgggg
acgagcggactcatggtcgtcgccaagagcgaggccgcctacaccgctctcaagcgggcg
ttcaaggagcgcacggtcgagaagatctaccacgcggtggtgcaggggcatccggacccg
ctcgtgggcacgatcgatgccccgatcggtcggcacccgaaccactcgtggaagttcgcc
gtcgtcccggacggcaagccctccgtgacgcactacgagacgctcgaggcctttcccggt
gcctccctgctcgagatccacctggagacgggccgtacgcatcagatccgcgtgcacatg
gcggcgcaccggcacccgtgcgtcggggacccgctctacggcgccgacccgacactctcg
gcccgcctcggactcacgcgtcagtggctgcatgcgcatcagctggccttcgcccatccg
acgacgggggagtgggtgcagttcgcctcgccctatccggaggacttccagcacgcgctc
gacgtgctgcgcggggaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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