KEGG   Micromonas commoda: MICPUN_61120
Entry
MICPUN_61120      CDS       T02695                                 
Symbol
MSH4
Name
(RefSeq) MutS 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
mis  Micromonas commoda
Brite
KEGG Orthology (KO) [BR:mis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mis03036]
    MICPUN_61120 (MSH4)
Chromosome and associated proteins [BR:mis03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    MICPUN_61120 (MSH4)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_16
Other DBs
NCBI-GeneID: 8246046
NCBI-ProteinID: XP_002504488
JGI: MicpuN3_61120
UniProt: C1EBM2
Position
9:complement(join(218041..220652,220762..221077))
AA seq 975 aa
MAAPTNEGAGPPSPPACTVIAAVLQNRAREVGVALFDKRGGPSLDLEQHVEVGESHATTL
CELQRARPGVILTLAGDRGGALGDALARFARAHDCALVELPRKQFDDIVGADLVARCARR
GSRLAPNPKDAYLAFAAAAAVLQFVEHGGVERATNDAENSLEPLVGRRRHRWEPFPLHEA
ARASPGTVVVTCCRSEHFIALDPAAARVLEIARPLGPTGEPVAEPKRSNPNRSSKPINPR
TDPVGAANARDSRARPHARRSLLGLLDTCATRGGSRLMKASLLQPLRDHATINARLDAVE
ELLRSGGLAHECRRRLAATTGGKDVEAVTSMFAEPRRRPSAPHSAPHSAPEGGPPSSEVR
PIDANPGRVAARIRTLLDTRRALEEVPKLGDALKNTNAGLLREIGEVLRDPFFAGFLHRI
DGVFEPDVVDGRSSFSAKTRQVFAVKSGVDAFLDIARRNFCEATEAAHELIRALRERTGL
ESPRLDYTATGMFQIKVTRSDFGRYSVNASHFDASLPTLHAIDTLGDDATRPIRRDDDDA
AGVRNDRVVRCTCDGLDVINRRCVDSADEAMRRSAAAVESVAASVRANVAALGALSSALS
LLDVLCAFAVRVMTSKGPYVRPVFGDRESPLAIEAGRHPVLEELPGVDFVANSAYLSPAF
NLSVVTGPNGGGKSTYLRQVAVLVVLAHSGCFVPATFFSAPPVDAIFTRVGTSDSMETDA
STFAVECRECARILSRATCHSLVLVDELGRSTDSEEGERFAWATAEALLERGCKTLFATH
ARRLGKLAQLYPNVRTSTMAVDLVGGRRRVAVDDPNRNGNGDDQNRRMECRYRLVDGACE
APHYGLRAAEALGGFPAEMMRDAWAIARRVETAAAAAAAAAAAAASDGGTAGGGFLPGHS
RRDAAGDDATRIAVERAARTAKVAERARRLFEIEAGGGTEGAEGRGGREKREAALASLRA
TAADVAGFGGGGACA
NT seq 2928 nt   +upstreamnt  +downstreamnt
atggccgccccgacgaacgaaggcgcggggccgccttcgccacccgcgtgcaccgtcatc
gcggcggtcctccagaaccgcgcgagggaggttggcgtcgcgctgttcgacaagcgcggc
ggcccgtcgctggacctggagcagcacgtcgaggttggagagagccacgccacgacgctg
tgcgagctgcagcgcgcgcgaccgggcgtgatcctgacgctcgcgggcgacaggggcggc
gcgctcggcgacgccctcgcgagattcgcgcgcgcgcacgattgcgcgctcgtcgagctt
ccgcggaagcagttcgacgacatcgtgggcgcggacctcgtcgcgcggtgcgcgcgccgc
ggctccaggctggcgcccaaccccaaggacgcctacctcgccttcgccgccgccgccgcg
gtgctgcagttcgtcgaacacggaggcgtcgagcgcgcgacgaacgacgcggaaaactcg
ttggaacccctagtaggacgtcgccgccaccgctgggaacccttcccgctgcacgaagcc
gcgcgcgcgtccccgggaaccgtcgtggtgacgtgctgcaggagcgagcacttcatcgcg
ctggacccggcagccgcgcgagtgctcgagatcgcgcgacctctcggccccaccggcgaa
cccgtcgccgaaccgaaacgttcaaacccgaaccgctcttctaaaccgattaacccccgg
acggacccggtcggcgccgcgaacgcgcgcgactctcgagcacgcccccacgcacgccgg
tcgctgctcggtttgctcgacacgtgcgccacgcgcggtgggtcgaggctgatgaaggcg
tcgctccttcagcccctgagggaccacgccacgataaacgcgaggctggacgcggtggag
gagctgcttcggtccggcgggctcgcgcacgagtgccggcggaggttggcagccaccacg
ggcgggaaagacgtcgaggcggtgacgtccatgttcgccgagccgcgacggcgcccgtcg
gcaccccactcggcaccccactcggcacccgagggtggccccccctcttcggaggtccgt
ccgatcgacgccaaccccggaagggtcgcggcgaggatccggacgcttctggacactcga
cgcgcgctcgaggaggtgccaaaactcggcgacgcgctgaaaaacaccaacgcggggttg
ctgagggagattggcgaggttcttcgcgaccccttcttcgccggtttcctgcatcgcatc
gacggggtgttcgagccggacgtggtggacggcagatccagtttctccgccaagacgagg
caggtgttcgcggtcaagtcaggcgtggatgcgtttctggacatcgccagaaggaacttt
tgcgaagccaccgaggctgcgcacgagctcatacgcgcccttcgcgagcgcaccggcctg
gaatcccccaggctcgattacaccgcgaccgggatgttccaaatcaaggtgacccggtcc
gatttcggcaggtactccgtgaacgcgtcccacttcgacgcgtctctcccgacgctgcac
gcgatcgacaccctcggcgacgacgcgacccgaccgataagaagggacgacgacgacgcc
gccggtgttcgaaacgaccgcgtcgtgcggtgcacgtgcgacggcctcgacgtcatcaac
cgacggtgcgtcgactcagccgacgaggcgatgcgaaggagcgccgccgcggttgaatcc
gtcgccgcgtccgtccgcgccaacgtcgccgcgttgggcgctctctcgtccgcgctctcg
ctgctcgacgtcctgtgcgcgttcgccgtccgggtcatgaccagcaaaggaccgtacgtt
cgaccggtgttcggcgatcgcgagagcccgctggcgatcgaagccggacggcacccggtg
ctggaggagctcccgggcgtggacttcgtcgccaactccgcctacctctccccggcgttc
aacctctccgtcgtgaccggcccgaacggtgggggtaagagcacgtacctgcggcaggtc
gcggtactcgtcgtcctggcgcactcgggatgcttcgtcccggctacgtttttcagcgcg
ccgcccgtcgacgcgatcttcacccgcgtcggcacgagcgactcgatggagacggacgcg
agcacgttcgcggtggagtgccgcgagtgcgccaggatcctgtcccgcgccacctgccac
tccttggtcctcgtcgacgagctcggtcgatccaccgacagcgaagagggcgagaggttc
gcgtgggcgacggcggaggctctgctggagcgcgggtgcaagaccctgttcgccacgcac
gctcggcgactcggtaaactcgcgcagctctacccgaacgtcaggacgtcgacgatggcg
gtggacctcgtgggcgggcggcggcgcgtggccgtggatgacccgaaccggaatggaaac
ggggatgaccaaaaccgacgcatggagtgcaggtacaggctcgtggacggcgcgtgcgag
gctccgcactacggcctccgagccgcggaggcgctcggaggttttcccgcggagatgatg
cgcgacgcgtgggcgatcgcgcgtcgggtagagaccgcggcggcggcggcggcagcggcg
gcggcggcggcggcgagcgatggcggcacagccggcggaggatttttgccgggacacagc
cggcgagacgcagccggcgacgacgcgacgagaatcgccgtcgaacgcgcggcgcggacg
gcgaaggtggcggagcgggcgaggcggctcttcgagattgaagccggcgggggtaccgag
ggtgccgagggtcgcggcgggcgcgagaagagggaggcggcgctcgcgtcgcttcgagcg
acggctgcggatgtggcgggatttggggggggaggcgcatgcgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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