KEGG   Micromonas commoda: MICPUN_72375
Entry
MICPUN_72375      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K13176  THO complex subunit 7
Organism
mis  Micromonas commoda
Pathway
mis03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUN_72375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_72375
   03041 Spliceosome [BR:mis03041]
    MICPUN_72375
Messenger RNA biogenesis [BR:mis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MICPUN_72375
Spliceosome [BR:mis03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MICPUN_72375
SSDB
Motif
Pfam: THOC7 Mod_r DUF2730 TMF_TATA_bd CP12 HalX
Other DBs
NCBI-GeneID: 8241720
NCBI-ProteinID: XP_002500957
JGI: MicpuN3_72375
UniProt: C1E1R6
Position
3:complement(<755725..>756288)
AA seq 188 aa
EEALIKKRLLTQTTTARPGADPPVKKLTKKYVAYVNALAEDDANGDGADAERAREAWLKE
IALYEFNMGRYRAVASANAREMEQYASASAAVDGEVRGTKDEIAELKTDLDGARLDRQHK
EEYEALRRLCTQFPSRSDTTARLASLEAEIAELETESEATASKLDLRKKQFALLLHLVNE
LQGELAEE
NT seq 564 nt   +upstreamnt  +downstreamnt
gaggaggcgctcattaagaaacgcctcctcacgcagaccaccaccgcgagacccggcgct
gacccgcccgtcaagaagcttaccaagaagtacgtcgcctacgtcaacgcgctcgccgag
gacgacgcgaacggggacggcgccgacgccgagcgtgcgagggaggcttggctcaaggag
atcgcgctgtacgagttcaacatggggcgataccgcgcggtcgcgtcggcgaacgcgcgg
gagatggagcagtacgcgagcgcgagcgccgcggtggacggcgaggtgcgcggcaccaag
gatgagatcgcggagctcaagacggacctcgacggcgcccggctcgaccgacagcacaag
gaggagtacgaggccctgcgccggttgtgcacgcaattcccgagcaggtcggacaccacc
gcgcggctggcgtcgctcgaggcggagatcgccgagctggagacggagtcggaggcgacg
gcgtccaagctcgatcttcgcaagaagcaattcgcgctgctcctgcacctggtgaacgag
ttgcaaggggagctcgcggaggag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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