KEGG   Micromonas commoda: MICPUN_77569
Entry
MICPUN_77569      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
mis  Micromonas commoda
Pathway
mis03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MICPUN_77569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mis03009]
    MICPUN_77569
Enzymes [BR:mis01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     MICPUN_77569
Ribosome biogenesis [BR:mis03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    MICPUN_77569
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 8250206
NCBI-ProteinID: XP_002507281
JGI: MicpuN3_77569
UniProt: C1FEB9
Position
1:1475803..1476474
AA seq 223 aa
METPKLDEDSAAVPGEGYIFVLEKATLEAAKIGKAYQILNCDDHANFLRRHGKDPANFRP
DIVHQELLAILDSPLNKAGRVNAVYVHTQKNVLIKISSQTRIPRTFKRFCGLMVQLLQKL
SIRAANGPEKLFKVVKGPVTKYFPAGARRVGFSFSAADVKDFKSYINELPSDACVIFTLG
AMSHGMIDSTYTDDLISVSHYPLSGACCIARITNCLENKFGIL
NT seq 672 nt   +upstreamnt  +downstreamnt
atggagaccccaaaacttgacgaagatagcgcagctgttccaggtgaaggttatattttt
gtcctggaaaaagctacgcttgaggcggcgaagattgggaaggcttatcagatccttaat
tgcgacgaccacgccaacttccttcgccggcatggaaaggatcccgccaattttcgtccg
gacatcgtgcaccaggagctgctcgctattcttgatagtcctttgaacaaggcaggtcgc
gtgaatgccgtttacgtacacacccagaaaaacgttctgatcaagataagttcacaaacc
cgaataccacgcacattcaagcgcttctgtggcttgatggttcagctgcttcaaaaactt
tcgatccgtgcagcaaatggacctgagaagctcttcaaggttgtgaaggggccggtgacg
aagtattttcctgctggtgcccgtcgtgtcgggttttctttcagcgcagctgatgtgaag
gatttcaagtcatatataaacgagcttcccagtgacgcttgcgtgatctttacacttggt
gcaatgagccacgggatgatcgactcaacatatacagatgacctgatatccgtgagccat
tatcctctgagtggtgcgtgttgcatcgcgcgtatcacaaattgtctggagaacaagttc
ggcattttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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