KEGG   Micromonas commoda: MICPUN_77618
Entry
MICPUN_77618      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
mis  Micromonas commoda
Pathway
mis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUN_77618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mis03041]
    MICPUN_77618
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_77618
Spliceosome [BR:mis03041]
 Complex B
  Other components
   Prp19 complex
    MICPUN_77618
 Complex C
   Prp19-CDC5 complex
    MICPUN_77618
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    MICPUN_77618
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 Myb_Cef
Other DBs
NCBI-GeneID: 8250085
NCBI-ProteinID: XP_002507153
JGI: MicpuN3_92928
UniProt: C1FDL9
Position
1:join(704725..705015,705111..706904)
AA seq 694 aa
MRILIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTRQEDEKLLHLAKLMPTQWRTVAPIVGRTPAQCLERYEKLLDAACQQDSNDALDDPRR
LKPGEIDPNPESKPARPDPVDMDEEEKEMLSEARARLANTKGKKAKRKAREKQLEEARRL
ASLQKRRELKAAGIDTVKRAKRLKGIDYNAEIPFERKPAPGFFDGSLERRALTLLSEETF
EPKGLADFEGGRQHDIEENLRKQDVKRQRIVQRHGVPHVMQTVDNNDPGNHRLHSELNLP
PPRVRESELDHAIRANGVLAHHERSSAHTVYQTLPDDKRFGNLARIGMPSGPDGISVSSR
SSPAQSIIGNEHLSSQFSQQNDDVWVGHDVVTAAGAVKCAMASLPVPNNEYQIVLPTPKP
EQNNADHLRDFDRMNANLNSSSSPIERATHLKSKLRCLARPSSFCIDSRTDTLRCSAEQI
ISRELGQMLEHHSLEHALHDTARLLTSPISLKQLALSAALITREINALRCTSDQLVNSDE
IIYASNYAHNDCIMDKSTSHVILSKIYGSYDTNTTPPSGEHARACTSMMRDARRAGKIGH
RIEIVTSGLQQRSAELHRRLSHIYAELVSMDHQYCSYNTLLYREQETYVQRVRSQKNMIT
LASEKERQHQFLHTQRASLLRTSEPQVEICENKR
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgaggatcttgatcaagggtggcgtgtggaaaaacacggaggatgaaattctgaaggcg
gcagtgatgaagtatgggaagaatcagtgggcccggatctcgtccctcctcgttcgcaag
tcagcgaaacaatgcaaggcccgttggtatgaatggcttgatccatcgataaagaagacc
gagtggacccgacaggaagatgaaaagttgctccaccttgcaaagttgatgcccacccag
tggcggactgtagccccaattgtgggccgcactcccgctcaatgtctcgagagatatgaa
aaactgctagatgcggcctgtcagcaagacagcaacgacgcgttggatgatcctcgccgt
ctcaagcctggtgaaatcgatccaaaccctgaatccaaacctgcacgacccgatcctgta
gatatggatgaggaagaaaaggaaatgctctcggaggcgcgcgcaagacttgcgaacact
aaagggaagaaagcaaaacgaaaagcaagagagaagcagctagaagaggcaaggcgactc
gcatcgctgcaaaagcggcgcgaactaaaggcagctggtatagatactgtcaagcgggcg
aaacggttgaagggcatcgactacaatgccgaaattccttttgaaagaaaaccagctcca
ggttttttcgacggtagtcttgagcggcgggcactcacacttttgagcgaggaaactttt
gaaccaaagggactggctgactttgagggcggtcgtcaacacgacattgaagaaaacctt
agaaagcaagacgtgaaacggcaaaggatagttcaacgtcacggtgtcccacatgttatg
cagactgtcgacaacaatgatcctgggaatcaccggttacacagtgagctcaaccttcca
ccccctcgggtccgggaaagtgagttagaccatgccatcagagctaacggcgtcctcgca
caccatgagcgttcctctgcgcacacagtatatcaaacgttgccagatgacaaacgattt
gggaatcttgcaagaattggtatgccgagtggccctgatggcatttccgtctccagcaga
tcttctcctgcgcagagtattataggtaacgagcatttatcctctcagtttagtcaacag
aacgatgatgtatgggttggacatgacgtagtaacagctgctggtgcagtgaaatgtgca
atggcctctcttcctgtgcccaacaatgagtatcagattgttttgccgacaccaaaacct
gaacaaaataatgccgaccacttacgtgatttcgatcgtatgaatgcgaatctcaactca
tcgtcttccccaattgaacgcgcgacgcacttgaaatcgaagctaagatgtttggcgcga
ccctcttcgttttgtatagactcaagaaccgacactttgagatgcagcgcagaacaaatc
atcagcagagagctgggacaaatgcttgagcatcactcattagagcatgcattgcacgac
acagctcgattgttgacgtccccgatttcattgaagcagttggcattatctgccgccctt
attaccagggaaataaatgcgctcaggtgtacaagcgatcagctagtgaacagtgatgaa
attatctacgcctccaactatgcgcacaacgactgcatcatggacaaatcaacttcacat
gtcattctcagcaaaatatatggaagctacgatactaatactacacctccctctggtgaa
cacgcgcgcgcttgtacgtctatgatgcgcgacgctcggcgagcaggtaaaatcgggcat
agaatagaaatcgtcacttcaggcctgcaacagcgttcggcagagttacacagaagacta
agtcacatctacgccgaactggtttcaatggatcatcagtactgctcttataacacgtta
ctctaccgtgagcaagaaacctatgttcagcgggtgcggtcgcagaaaaacatgatcacc
ctcgcatcagagaaagaacgccaacatcaatttctgcacacccagcgtgcatcactttta
agaacttcggagccgcaagttgagatctgtgaaaataaacgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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