KEGG   Mycobacterium intracellulare MOTT-02: OCO_43210
Entry
OCO_43210         CDS       T01754                                 
Name
(GenBank) RNA polymerase sigma factor SigL
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mit  Mycobacterium intracellulare MOTT-02
Brite
KEGG Orthology (KO) [BR:mit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mit03021]
    OCO_43210
Transcription machinery [BR:mit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OCO_43210
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_23 GerE Terminase_5 PaaA_PaaC HTH_38 Phage_antitermQ HTH_Tnp_ISL3 HTH_10
Other DBs
NCBI-ProteinID: AFC50684
Position
complement(4556373..4556864)
AA seq 163 aa
MKALFDEHAAVLWRYALRLTGDTSQSEDVVQETLLRAWQHPEVVGDTERSARAWLFTVAR
NMIIDDRRSARYRNVVGSTDVSGAPEQSTPDEVNAALDRLLIADAMAQLSADHRAVIERS
YYRGWTTTQIAADLGIAEGTVKSRLHYAVRALRLTLQELGVTR
NT seq 492 nt   +upstreamnt  +downstreamnt
atgaaggcgcttttcgacgaacacgccgcggttctgtggcgctacgcgttgcgcctgacg
ggggacacgagccagtccgaggatgtggtccaggaaacgctgctgcgggcgtggcagcat
cccgaagtcgtcggggacaccgagcgctcggcgcgggcgtggttgttcaccgtcgcccgc
aacatgatcatcgacgatcggcgcagcgcgcggtaccgcaacgtcgtcggttcgaccgac
gtctcgggggcgcccgaacagtccacgccggacgaggtcaacgcggccctggaccggttg
ctgatagcggacgcgatggcccagctgtccgccgatcaccgagcggtgatcgaacggtcc
tactaccgcggttggaccaccacgcagatcgctgcagacctcggcatcgccgagggaacg
gtgaagtcgcgactacactatgccgtacgggcgttgcgactcactctgcaggaacttggg
gttacccgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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