KEGG   Microvirga sp. 17 mud 1-3: C4E04_02970
Entry
C4E04_02970       CDS       T05470                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
miv  Microvirga sp. 17 mud 1-3
Brite
KEGG Orthology (KO) [BR:miv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:miv03032]
    C4E04_02970
   03400 DNA repair and recombination proteins [BR:miv03400]
    C4E04_02970
Enzymes [BR:miv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     C4E04_02970
DNA replication proteins [BR:miv03032]
 Prokaryotic type
  DNA Topoisomerases
   C4E04_02970
DNA repair and recombination proteins [BR:miv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C4E04_02970
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AWM85804
UniProt: A0A2Z3I1L6
Position
646207..647409
AA seq 400 aa
MSLDPSLDSKPSTDDIVDPRDAAETAGLLYVSDEEPGIRRRKAGKGFSYKGPDGRKVTDK
ATLERIRSLAIPPAYTDVWICAKSNGHIQATGRDARGRKQYRYHPAFREIRDSTKYEHML
DFAKALPNIRNTIDTHMSLRGLPREKVLATVVHLLEDTLIRVGNSDYARQNKSYGLTTLR
DPHVKVEGGELRFQFKGKSGKTWNLKVRDRRIARIVKACQDLPGQHLFQYLDETGTQQSV
TSADVNAYLREITGRDITAKDFRTWAGTVLAALALSEFEEFDSEAMAKKNIRSAIETVAA
RLGNTPAICRKCYVHPEVFSTYLDGGLLLEIREEVEAELRENLPALKPEEAAVLSLLQAR
LSAEAASSKAKSNSKAVSNSKAPKTKRSPRKTSHGAEARA
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtcccttgacccgtccctcgactcgaagccctccaccgacgacatcgtcgatccgcgc
gatgcggccgaaacggctggcctcctctacgtgtccgacgaagagcccggcatccggcgg
cgcaaggccgggaaaggcttttcctataaggggccagacggccgcaaggtgaccgacaag
gcgaccctggagcgcatccggtccctcgcgattcccccggcctatacggatgtgtggatc
tgcgccaaatccaacggtcatatccaggcgacggggcgcgatgcgcgtgggcgcaagcag
taccgctaccatcccgctttccgggagatccgcgacagcacgaaatacgagcacatgctc
gatttcgcgaaggccctgccgaatatccgcaacaccatcgacacccatatgtccttacgg
gggttgccgcgcgagaaggtgctcgccaccgtggtgcatctcctcgaagacacgctcatc
cgggtcggcaattccgactatgcgcggcagaacaagagctacgggctcaccacgctgcgt
gatcctcacgtgaaggtcgagggcggggagctgcgtttccagttcaagggcaagagcggc
aagacctggaacctcaaggtcagggaccgacgcatcgcgaggatcgtcaaggcctgccag
gatctgccggggcagcatctcttccagtatctggacgagacgggcacgcagcaatccgtc
acgtccgccgacgtgaacgcctatctgcgcgagatcaccgggcgcgacatcaccgcgaag
gatttcaggacctgggccggaaccgtgctcgcggccctcgccctgtccgagttcgaagaa
ttcgacagcgaggccatggcgaagaagaacatccgctccgccatcgagacggtcgctgca
cgcctcggcaacacgccggccatctgccgcaaatgctatgtgcatcccgaggtcttctcg
acctatctcgacggtgggcttctcctggaaatccgggaggaggtggaggcggaactgcgc
gagaacctgccggcgctcaagcccgaggaggcagctgttctctcgctcctgcaggcccgc
ctgtcggcggaggccgcctcgtccaaggcaaagtccaactccaaggccgtatccaattcc
aaggcgccgaaaacaaagcgcagcccgcgcaaaacgagccacggcgcggaagcgcgggcc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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