KEGG   Microbacterium sp. XT11: AB663_001795
Entry
AB663_001795      CDS       T04243                                 
Name
(GenBank) DNA lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mix  Microbacterium sp. XT11
Pathway
mix03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AB663_001795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mix03400]
    AB663_001795
Enzymes [BR:mix01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AB663_001795
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AB663_001795
DNA repair and recombination proteins [BR:mix03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AB663_001795
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Ribosomal_S13 zf-TFIIB NFACT_N DZR
Other DBs
NCBI-ProteinID: ALX66560
Position
complement(1888618..1889481)
AA seq 287 aa
MPEMPEVQGLTAFLDDRAVGRTITRAAVSAISALKTYDPPIHALQAAEVTGASRHGKFIV
LSCGDDLHLVFHLAKAGWLRWYDELPTTLIKPGKSPIALRVALDDGAGFDLTEAGTKRSL
AVYVVRDPHDVPGIARLGPDPLDPSFTRDVFAGLLEGKRMQIKGLLRDQGVIAGIGNAYS
DEILHAARMSPYANAGKLDDAEIDRLYAAMQTTLAEAVAEASGKPPADLKDAKRRGMQVH
ARRGEACPVCGDTVRSVFFADRSMEYCPTCQTGGKPLADRRLSRLLK
NT seq 864 nt   +upstreamnt  +downstreamnt
atgccggagatgcccgaggtgcaaggcctgaccgcgttcctggacgatcgcgccgtcgga
cgcacgatcacccgtgccgccgtgtccgccatctcggcgctgaagacctatgatccgccg
atccatgcccttcaggccgccgaggtcaccggcgcctctcggcacggcaagttcatcgtg
ctctcgtgcggcgacgacctgcatctcgtgttccatctcgcgaaggcgggctggctgcgc
tggtacgacgagctgccgaccacgctcatcaagccaggcaagtcgccgatcgccctgcgg
gtcgcgctcgacgacggcgccggcttcgacctcaccgaggcgggcacgaagaggtcgctc
gcggtgtacgtcgtgcgcgacccgcatgacgtccctggcatcgcccggctcggccccgat
ccgctcgacccgtcgttcacccgcgatgtgttcgccgggctgctcgagggcaagcggatg
cagatcaaggggctgctgcgcgaccagggcgtgatcgccgggatcggcaacgcgtactcc
gacgagatcctgcatgccgcgcgcatgtcgccgtacgccaacgcgggcaagctcgatgat
gccgagatcgaccgcctgtacgcggccatgcagacgactctggcggaggccgtcgccgag
gcatcaggcaagccgcccgccgatctgaaagacgcgaagcggcgcggcatgcaggtgcac
gcccggcgcggcgaggcctgcccggtgtgcggggacaccgtgcggagcgtgttcttcgcc
gaccgatcgatggagtactgcccgacctgccagaccggaggaaagccgctcgccgatcgc
cgcctgtcgcgactgctcaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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