KEGG   Mycolicibacter sinensis: JDM601_2684
Entry
JDM601_2684       CDS       T01512                                 
Symbol
ddl
Name
(GenBank) d-alanine--D-alanine ligase DdlA
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
mjd  Mycolicibacter sinensis
Pathway
mjd00470  D-Amino acid metabolism
mjd00550  Peptidoglycan biosynthesis
mjd01100  Metabolic pathways
mjd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:mjd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JDM601_2684 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    JDM601_2684 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    JDM601_2684 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mjd01011]
    JDM601_2684 (ddl)
Enzymes [BR:mjd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     JDM601_2684 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:mjd01011]
 Precursor biosynthesis
  Amino acid ligase
   JDM601_2684 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_3 RimK ATP-grasp_4 CPSase_L_D2
Other DBs
NCBI-ProteinID: AEF36684
UniProt: F5YYD1
Position
complement(2867694..2868785)
AA seq 363 aa
MAVVFGGRSSEHAISCVSAGSILRNLDPQRFEVIAVGITPEGSWVLTSGDPDAWAISGRQ
LPAVSKASGAELTLPADPQRSGQLVALSGGAPTELLASVDVVFPVLHGPYGEDGTVQGLL
ELAGVPYVGAGVLASAAGMDKEFTKKLLAAEGLPIGPYAVLRANQATLSIEDRERLGLPL
FVKPARGGSSIGVTRVASHDELPAAIAEARRHDPKVIVEAAIVGRELECGVLEFPDGTVA
ASTVGEIRVVRGCAEHDDSFYDFATKYLDDAAELDVPAKIDDEVADTVRQLAIRAFAALD
CQGLARVDFFHTDAGPVINEINTMPGFTTISMYPRMWEASGVDYPTLLATMVDTAQARGV
GLR
NT seq 1092 nt   +upstreamnt  +downstreamnt
gtggccgtcgtgttcggcggccgcagcagcgaacacgcgatctcctgcgtgtcggcgggc
agcatcctgcgcaacctggatccgcagcgtttcgaggtcatcgccgtggggatcacgccg
gaagggtcgtgggtgctcaccagcggcgatccggacgcctgggcgatcagcggccggcaa
ctgcccgcggtgagcaaggcgtccggcgccgaactgacgctgcccgctgacccgcagcgc
agcggccagctggtcgcgttgtccggcggggcgcccacggagctgctggcgtcggtcgac
gtggtgttcccggtgctgcacggtccctacggcgaggacggcaccgtgcaggggctgctg
gagctggccggcgtgccctatgtgggtgccggagtgctggccagcgccgccgggatggac
aaggagttcaccaagaagctgctggcggccgaagggctgccgatcggtccgtacgcggtg
ttgcgggccaaccaggcgacgctgtcgatcgaggaccgcgagcgcctggggctgccgttg
ttcgtcaaaccggcgcgcggcggatcgtcgatcggggtcacccgggtggcgtcgcatgac
gagcttcccgccgccatcgccgaggcccgccggcacgacccgaaggtcatcgtcgaggcg
gccatcgtcggccgcgaactcgagtgcggggtgctcgaattccccgacggcaccgtggcg
gccagcacggtgggggagatccgggtggtgcgcggctgcgccgagcatgacgactccttc
tatgacttcgccaccaaatacctcgatgacgccgcagaactcgacgtgcccgcaaagatc
gacgatgaggtcgcggacacggtgcggcagttggcgattcgtgcgttcgccgcgctggat
tgccaggggctggcgcgggtggacttctttcacaccgacgccggtccggtgatcaacgag
atcaacaccatgcccgggttcaccacgatctcgatgtacccgcggatgtgggaggccagc
ggggtggactacccgacgttgctggcgacgatggtcgacaccgcgcaggcccgcggcgtg
ggcctgcgctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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