KEGG   Manis javanica (Malayan pangolin): 108383415
Entry
108383415         CDS       T06054                                 
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X3
  KO
K06225  patched 1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv04024  cAMP signaling pathway
mjv04340  Hedgehog signaling pathway
mjv04360  Axon guidance
mjv05200  Pathways in cancer
mjv05205  Proteoglycans in cancer
mjv05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    108383415 (PTCH1)
   04024 cAMP signaling pathway
    108383415 (PTCH1)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    108383415 (PTCH1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108383415 (PTCH1)
   05205 Proteoglycans in cancer
    108383415 (PTCH1)
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    108383415 (PTCH1)
SSDB
Motif
Pfam: Patched Sterol-sensing
Other DBs
NCBI-GeneID: 108383415
NCBI-ProteinID: XP_017495378
Position
Unknown
AA seq 1286 aa
MFNPQLMIQTPKEEDADVLTTEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT
ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWTNFDPLEFLEELKKI
NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPTTAPNKNTSRPLDMALVLNGGCHGLS
RKYMHWQEELIVGGTVKNSSGHLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK
AAAILEAWQRMYVEVVQQSVTQNSTQRVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA
YACLTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG
VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR
AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYT
ETQDSTHYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVT
VTQDALSCQSPESASSTRDLLSQFSDSSLHCLEPRCTKWTLSSFAEKHYAPFLLKPRAKV
VVIFLFLGLLGVSLYGTTRVHDGLDLTDIVPRETREHDFIAAQFKYFSFYNMYIVTQKAD
YPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPN
NYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKRRLVDTDGIINPSAFYIYLTAWVSNDP
VAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAI
EKVRAVCNNYTSLGLPSYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCAVFLLNPW
TAGIIVAVLALMTVELFGMMGLIGIKLSAVPVVILVASVGIGVEFTVHVALAFLTAIGDE
NRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTTLGVLNGLVLL
PVLLSLFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHTSNGSDSSDSEYSSQTTV
SGISEELQHYEAQQGTRGPAHQVIVEATDNPVFARSTVVPPRTRRRPLWSPRQQPHQDAK
APPGRPGQQPWKESPAGGSRPPPYRPRRDAFEVSAEGPSPGSRDRAGPRGTRSHHAQHPA
FATTGYCQPVTTVTASASVTVAVRPPPAHSWSPQGVPCPEVCGAGCGPFEDPHVPSSIHC
GRRGSKVEVIELQDVECEERPLGSCS
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgttcaatcctcagctcatgattcagaccccaaaggaagaagatgctgacgtcctgacc
acggaggcgctgcgacagcacctggactctgcgctccaggccagccgagtccacgtgtat
atgtacaacaggcaatggaaattggaacatttgtgttacaaatctggagaacttattaca
gaaacaggttacatggatcagatcatagagtatttatacccttgcttaattattacacct
ttggactgcttctgggaaggggcgaagttacagtcaggcaccgcctacctactaggtaag
cctcctttgcagtggacaaactttgaccctttggaattcctagaagagttaaagaaaata
aactaccaagtggacagctgggaggaaatgctgaataaggccgaagttggtcatggttac
atggaccggccctgcctcaatccggctgacccagactgccccaccacggcacccaacaaa
aataccagcagacctcttgatatggccctggttttgaatggtgggtgtcacggattatcc
agaaagtatatgcactggcaggaggagctgatcgtgggtggcacagtcaagaacagcagc
gggcaccttgtcagtgcccacgccttgcagaccatgtttcagttaatgacccccaagcag
atgtatgaacacttcaaggggtatgagtatgtctcgcacatcaactggaatgaggacaag
gcagcggccatcctggaggcctggcagaggatgtatgtggaggtggtgcaacagagcgtc
actcagaactccacccagagggtgctttccttcaccacgacgaccctggatgacatcctc
aagtccttctctgatgtcagtgtcatccgggtggccagcggctacttactgatgcttgcc
tatgcctgtttaaccatgctgcgttgggactgcgccaagtcccagggtgccgtggggctg
gcgggcgtcctcttggtggcgctgtccgtggctgcaggactgggcctgtgctcactgatc
gggatttcctttaatgctgcaacaactcaggttctgccatttctcgctcttggtgttggc
gtggatgacgttttcctcctggcacatgcgtttagtgaaacgggacagaataaaagaatc
ccctttgaggacaggaccggggagtgcctcaagcgcacgggagccagcgtggccctcaca
tccatcagcaacgtcacagccttcttcatggctgcattgatccccatccctgctctgcgg
gccttctccctccaggcggctgtagtggtggtgttcaattttgctatggttctgctaatt
ttccctgcaattctcagcatggatttgtatcgacgtgaggacaggagattggatattttc
tgctgtttcacaagcccctgtgtcagcagggtgatccaggttgaacctcaggcctacaca
gagactcaagatagcacccactacagccccccacccccctacagcagccacagcttcgcc
cacgaaacccagatcaccatgcaatccacggtgcagctccgcacagagtatgacccgcac
acgcacgtgtactacaccaccgcggagccgcgctccgagatctctgtgcagcctgtcacc
gtgacccaggacgccctcagctgccagagccctgagagcgccagctccacgcgggacctg
ctctcccagttctccgactccagtctccactgcctggagccccgctgcaccaagtggaca
ctctcatcatttgccgagaaacactatgctcctttcctcctgaagccaagagccaaggtc
gtggtgatcttccttttcctgggcttgctgggggtcagcctttatgggaccacccgagtg
catgacgggctagacctgacagacatcgtgcctcgggaaaccagagaacatgattttatt
gctgcacagttcaaatacttttctttctacaacatgtatatagtcacccaaaaagcagac
tacccgaatatccagcacttactttatgaccttcacaggagtttcagtaatgtgaagtat
gtcatgttagaagaaaataaacagcttcccaaaatgtggctgcattacttcagagactgg
ctccaagggctacaggatgcatttgacagtgactgggaaactgggaaaatcatgccaaac
aattacaaaaatggatcagacgatggggtccttgcctataaactcctggtgcaaactggc
agccgcgataagcccatcgacatcagtcagttgactaaacggcgcctggtggatacagac
ggcatcattaatcccagtgctttctacatctacctgactgcttgggtgagcaacgacccc
gtggcttacgccgcctcccaggccaacatcaggccccaccgtcctgagtgggtccacgat
aaagctgactacatgccagaaaccagactgagaatcccagcagcagagcccatcgaatat
gctcagttccctttctacctcaatggcttgcgggacacctcggacttcgtggaagcaatc
gagaaggtccgagccgtctgcaacaactacacgagcctggggctccccagctaccccaat
ggctaccccttcctcttctgggaacagtacattggtctgcgccactggctcctgctgtcc
atcagcgtagtgctggcctgcacgttcctcgtgtgcgccgtcttcctcctgaacccctgg
actgctgggatcattgtggcggtgcttgcactgatgacggtcgagctttttggcatgatg
ggcctcatcggcatcaagctgagtgctgtgcccgtggtcatcctggttgcttctgttggc
atcggagtggaattcaccgttcacgttgctctggcatttctcacggccattggcgacgag
aaccgcagggccgtgctcgccctggagcacatgttcgcacccgtgctggacggggctgtc
tctacgctgctgggagtgctgatgctcgccgggtccgagtttgacttcattgtcaggtat
ttctttgctgtcctggcgatcctaacaaccctgggcgtcctcaatgggctggtcttgctc
cccgtcctcttgtccctgtttggaccataccctgaggtgtctccagccaacgggctgaac
cggctgcccaccccatcccccgagccaccccccagcgtggtccggttcgccgtgccccct
ggtcacaccagcaatgggtctgactcctctgactccgagtacagttctcagacaacagtg
tcaggcatcagtgaggagctgcagcactatgaggcccagcagggcacacggggtcctgcc
caccaagtgatcgtggaggccaccgacaacccagtcttcgcccgctccactgtggtccct
cccagaaccagacgtcggcccctctggagcccccggcagcagccccaccaggacgccaag
gcccctcctgggcggccaggccagcagccctggaaggagtcgcctgcaggaggctcaagg
ccaccgccctatcggccacgcagagacgcctttgaggtttcagctgaagggccctcccct
ggcagcagggaccgtgcgggcccccggggcacccgttcccaccacgcccagcacccagca
ttcgccaccacgggctactgccagccagttaccacagtgacagcctcggcatctgtgacg
gtggctgtgcgccccccacccgcacacagctggagcccccaaggggtgccctgccccgag
gtctgcggcgctggttgtgggccctttgaggacccacatgtgccctctagcatccactgc
ggacggaggggctccaaggtggaagtcatagaactgcaggacgtggagtgtgaggagcgg
cccctgggcagctgcagctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system