KEGG   Manis javanica (Malayan pangolin): 108398221
Entry
108398221         CDS       T06054                                 
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
  KO
K13126  polyadenylate-binding protein
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03015  mRNA surveillance pathway
mjv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108398221 (PABPC5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108398221 (PABPC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjv03019]
    108398221 (PABPC5)
   03041 Spliceosome [BR:mjv03041]
    108398221 (PABPC5)
Messenger RNA biogenesis [BR:mjv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108398221 (PABPC5)
   mRNA cycle factors
    Stress granule specific factors
     108398221 (PABPC5)
Spliceosome [BR:mjv03041]
 Complex C
  Other components
   Complex C specific factors
    108398221 (PABPC5)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_7 RRM_3 TC1
Other DBs
NCBI-GeneID: 108398221
NCBI-ProteinID: XP_017517557
Position
Unknown
AA seq 382 aa
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPMTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLEEIFSEYGPTESVKVIRDANGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDERVDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIVGSRPLHVTLGHTRRRW
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaggctgccctg
tacgtgggtgacctggacccagatgttactgaggacatgctgtataaaaagttcaggcct
gctggccctctgcgcttcactagaatctgtcgtgacccgatgacccgcagccccctgggc
tacggttatgttaacttccgcttccctgcagatgctgagtgggccctgaacaccatgaat
tttgacctaattaatggcaaaccattccgcctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaagtccatagacaataga
gcccttttttatttattttctgcatttgggaacattctctcctgcaaagtcgtatgtgat
gacaacggctctaagggttatgcctatgtgcactttgacagcctagctgctgccaatagg
gccatctggcacatgaacggagtgcggctcaacaaccgccaggtgtatgttggacgattc
aaatttccggaagagcgggcagccgaagtcagaaccagggatagagcaactttcaccaat
gttttcgttaaaaactttggagatgacatggatgacgaaaaactggaggaaatttttagt
gaatatgggccaactgagagtgttaaggtaataagagatgccaatgggaaatctaaaggc
tttggatttgtgagatacgagacacacgaggctgcccaaaaggctgtgttagacctgcat
gggaagtccatcgatgggaaggtcctctatgtagggcgagcacagaagaaaattgaacgt
ctggctgagttaaggcgaagatttgaacggctgagattaaaagaaaaaagtcgtcctcca
ggggtgcctatctatattaagaacctggatgagagggtcgatgatgaaaaactgaaggag
gaattttcttcttttggatcaattagtcgggccaaagtgatggtggaagtggggcaaggc
aaagggtttggtgtcgtctgcttctcctcttttgaagaggctaccaaagcagtggatgaa
atgaatggtcgcatagtgggctccaggcccctgcatgttaccctgggccacaccaggcgc
aggtggtga

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