KEGG   Manis javanica (Malayan pangolin): 108403316
Entry
108403316         CDS       T06054                                 
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108403316 (TAF1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:mjv01001]
    108403316 (TAF1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mjv03021]
    108403316 (TAF1)
   03036 Chromosome and associated proteins [BR:mjv03036]
    108403316 (TAF1)
Enzymes [BR:mjv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     108403316 (TAF1)
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     108403316 (TAF1)
Protein kinases [BR:mjv01001]
 Serine/threonine kinases: Other
  TAF1 family
   108403316 (TAF1)
Transcription machinery [BR:mjv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108403316 (TAF1)
Chromosome and associated proteins [BR:mjv03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    108403316 (TAF1)
SSDB
Motif
Pfam: DUF3591 Bromodomain TBP-binding zf-CCHC_6 Cac1_C Opi1 Ribosomal_L44 zinc_ribbon_12
Other DBs
NCBI-GeneID: 108403316
NCBI-ProteinID: XP_036858615
Position
Unknown
AA seq 1893 aa
MGSGWDLLLVASAFGAAAIMSDTDSDEDSAGGGSFSLTGFLFGNINGAGQLEGESILDDE
CKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWIRSTEDAVDYSDINEVAEDES
RRCQQTMGSLQPLCNSDYDEDDYDADCEDIDCKLMPPPPPPAGPMKKDKDQDAITCVSED
GEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEVTQAESENGKLTLPLAGIMQYDAT
KLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVEC
SVESEANQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVTDTKPRVAE
WRYGPARLWYDMLGVPEDGSGFDYGFKLRKMEHEPVIKNRLMEDFRKLEESNGSDLLADE
NFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDD
DKPWYSIFPIDNEELVYGCWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEA
TSNSPCKESKKESSLKKSRILLGKTGVIKEEPQQNMCQPEVKDPWNLSNDEYYYPKQQGL
RGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLL
KHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKI
KNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPET
DFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKD
RPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMV
SPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIA
AMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSL
KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE
RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSRE
REEQERKELQRMLLAAGSAAAGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYV
RCETVRKPAVIDAYVRIRNTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEK
EKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQE
EELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGT
TVHCDYLNRPHKSIHRRRTDPMVTLSSILECIISDMRELPNTYPFHTPVNGKVVKDYYKI
ITRPMDLQTLRENVRKRLYPSREEFRDHLELIVKNSATYNGPKHSLTQISQSMLDLCDEK
LKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVADSWPFHHPVNKKFVPDY
YKVIVSPMDLETIRKNISKHKYQGRDSFLDDVNLILANSVKYNGPESQYTKTAQEIVNIC
YQTLTEYDEHLTQLEKDICTAKEAALEEVDLESLDPMTPGPYTPQAKPPDLYDNNTSLSM
SRDASVFQDESNMSVLDIPTGTPEKQVTEESEDADGDLADEEEGTVQQPQASVLYEDLLM
SEGEDDEEDAGSEEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPCMLQENTRMGLENEES
MMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEQRS
GPSVLSQVQLSEDEEDSEDFHSIAGDSDVDSDE
NT seq 5682 nt   +upstreamnt  +downstreamnt
atgggatcaggctgggatttgctcttggtggcttccgcttttggcgctgccgccatcatg
tcagacacggacagcgatgaggattctgcgggaggcggctcattttctttaaccggtttc
ctctttggcaacatcaatggagccgggcagctggagggggaaagcatcttggatgatgag
tgtaagaagcacttggcaggcttgggggctttgggtctgggcagcctgatcactgaactc
accgcaaatgaagaactgactgggactgatggtgccctggtaaatgatgaaggctggatc
aggagtacagaagatgctgtggactattcagacatcaatgaggtagcggaagacgaaagc
cgaaggtgtcagcagacaatggggagcttacagcccctttgcaactcagattatgatgaa
gatgactatgatgctgattgtgaagacattgattgcaagttgatgcctcctccacctcca
cctgcaggacctatgaagaaggataaagaccaagatgctattacctgtgtgtctgaggat
ggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaagtg
gacttcagtagttcctctgactcagaatctgagatgggacctcaggaagtaacacaggca
gaatctgagaacggaaagctgaccctaccattggctgggattatgcagtatgatgccacc
aagctgttgccaagtgtcacagaacttttcccagaatttcgacctggaaaggtgttacgc
ttcctacgtctttttgggccagggaagaacgtcccatctgtttggcggagtgctcggaga
aagaggaaaaagaagcaccgtgagctgatacaagaagagcagatccaggaggtggagtgc
tcagtagaatcagaagccaaccagaagtctttgtggaactatgactacgctccaccacca
cctccagaacagtgtctctctgatgatgaaatcacaatgatggctcctgtggagtccaaa
ttttcccagtcaactggagatacagataaagtgacagataccaaaccaagagtggctgag
tggcgttacggccctgcccgactgtggtatgatatgctgggtgtccctgaagatggcagt
gggtttgactatggcttcaaactgagaaagatggaacatgaacctgtgataaaaaataga
ttgatggaggactttaggaagcttgaggaaagcaatggctctgatcttctggctgatgaa
aacttcctgatggtgacacagctgcattgggaggatgatatcatctgggatggagaggat
gtcaaacacaaagggacaaaacctcagcgtgcaagcctggcaggctggcttccttccagc
atgacacgtaatgccatggcttataacgttcagcaaggttttgcagccaccctggatgat
gacaagccttggtattccattttccccattgacaatgaggagctagtatatggatgctgg
gaggacaatatcatttgggatgcccaggccatgccccgactgttggagcctcctgttctg
acacttgatcccaatgatgagaacctcattttggaaattcctgatgagaaggaagaagcc
acctctaactccccctgtaaggagagcaagaaggaatcatctctgaagaagagtagaatt
ctcttagggaaaacaggtgtcatcaaggaggaaccacagcagaacatgtgtcagccagaa
gtgaaagatccatggaatctctccaatgatgaatattactaccccaagcaacagggtctt
agaggcacttttggaggaaatattatccagcactcaattcctgctgtggagttacggcag
cccttctttcccacccacatggggcccatcaaactccggcagttccatcgcccacctctg
aagaagtattcctttggggcactatctcagccaggtcctcattcagtccagcccttgcta
aagcatatcaaaaagaaggctaagatgagagaacaggagaggcaagcttcaggtggtgga
gagatgttttttatgcgcacacctcaggacctcacaggcaaagatggagatcttattctt
gcagaatacagtgaggaaaatggaccattaatgatgcaggttggaatggcaaccaagata
aaaaactactataagcggaaacctggaaaagaccctggagcccctgattgtaaatacgga
gaaactgtttactgccatacatctccttttctgggatctctccatcctggccaattactg
caggcatttgagaacaacctttttcgggccccaatttaccttcataaaatgccagaaact
gactttcttatcattcggacaagacaaggttactatattcgggaattagtggatattttt
gtggttggccagcagtgccccttgtttgaagttcctgggcctaactccaaaagggcgaat
acacacattcgagactttctgcaggtttttatttaccgcctcttctggaagagtaaagat
cggccacggcggatccgaatggaagatataaaaaaagcctttccttcccattcagaaagc
agcatccggaagaggctaaagctctgcgctgacttcaaacgcacagggatggactcaaac
tggtgggtgctgaaatctgattttcgtttaccaactgaagaggagatcagagctatggtg
tctccagagcagtgctgtgcttattatagcatgatagctgctgagcagcgactaaaggat
gctggctatggtgagaagtccttttttgctccagaagaagaaaatgaagaagattttcag
atgaagattgatgatgaggttcgcacagctccttggaacaccacaagggccttcattgct
gccatgaagggcaagtgtctcctagaggtgactggagtggcagatcccacagggtgtggt
gaagggttctcgtatgtgaagattccaaacaaaccaacacagcagaaggatgataaggag
cctcagccagtgaagaaaacagtgacaggaacagatgcagatctccgtcgcctctctctg
aaaaatgccaagcaacttcttcgtaaattcggcgtgcctgaggaagagattaaaaagttg
tcccgctgggaagtgattgatgtggtacgcacaatgtcaacagaacaggcccgctctgga
gagggacccatgagtaaatttgctcgtggatcaaggttttctgtggctgagcatcaagag
cgttacaaagaggaatgtcagcgcatctttgacctgcagaacaaggttttgtcatcaact
gaagtcttatcaactgacacagacagcagctcagctgaagacagtgactttgaagaaatg
ggaaagaacatcgagaacatgttgcagaataagaaaaccagttctcagctatcacgtgaa
cgggaggagcaggagcggaaggaactacagcggatgttattggcagcaggctcagcagca
gcaggtaacaatcacagagatgatgacacagcttctgtgactagcctgaactcttctgcc
actggccgttgtctcaagatttatcgcacatttcgagatgaagaagggaaagagtatgtt
cgctgtgagacagttagaaagccagctgtcattgatgcctatgtgcgcatacggaacaca
aaagatgaggaattcattcgaaaatttgccctttttgatgagcagcatcgagaagagatg
cgaaaagaacggcgcaggattcaagagcagctgaggcggcttaagagaaaccaggaaaag
gagaagcttaagggccctcctgagaagaagcccaaaaaaatgaaggagcgtcctgacctg
aaactgaaatgtggggcttgtggtgcgattgggcacatgaggacaaacaaattctgcccc
ctctattatcaaacaaatgccccaccttccaaccctgttgccatgactgaagagcaggag
gaggagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaagattgtcttggggaaacagctaattgagagcgcagatgaagttcgcagaaaatct
ctggttctcaagttccctaaacagcaacttcctccaaagaagaaacggcgagttggaacc
actgttcactgtgactatttgaatagacctcataagtccatccaccggcgccggacagac
cccatggtgacattgtcctccatcttggagtgtatcatcagtgacatgagagagcttcca
aatacataccctttccacactccagtcaatggaaaggttgtaaaggactactacaaaatt
atcactcgaccaatggacttacaaacactccgtgaaaatgtgcgtaaacgcctctaccca
tctcgggaagagttcagagaccatttggaattaattgtaaaaaacagtgcaacttacaat
ggtccgaagcactcactgacccagatctctcaatccatgctggatctttgtgatgaaaaa
ctcaaagagaaagaagacaaattggctcgtttagagaaagctatcaacccgttgctggat
gatgatgaccaagtggcattttctttcattctagacaacattgtcacccagaaaatgatg
gcagttgcagattcttggccatttcatcacccagttaataagaagttcgttccagattat
tacaaagtgattgtgagtccaatggatttagagactatacgtaagaatatctccaagcac
aagtatcagggtcgggacagctttctggatgatgtcaaccttattctggccaacagtgtt
aagtataatgggcctgagagtcagtatactaagactgctcaggagattgtgaacatctgt
taccagacattgactgagtatgatgagcatttgactcaacttgagaaggatatttgtaca
gctaaagaagcagctttggaggaagtagatttagaaagcttggaccccatgactccaggc
ccttacacaccccaggctaagcctcctgatttgtatgataacaacacatccctcagtatg
tctcgagatgcctctgtatttcaagatgagagcaatatgtctgtcctggatattcctact
ggcactccagaaaagcaggtaacagaggaaagtgaagatgcagatggtgatcttgcagat
gaagaggaaggaactgtgcaacagcctcaagccagtgtcctgtatgaggatttgcttatg
tctgaaggagaagatgatgaggaagatgctgggagtgaagaagaaggagataatcctttc
tctgctatccagctgagtgaaagtggaagtgactccgatgtaggatctggtgggataaga
cccaaacagccctgcatgcttcaagagaacacaaggatgggcctggaaaatgaagaaagc
atgatgtcctatgagggagacggtggggaggcttctcatggtttggaggatagcaacatc
agttatgggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttcagc
agcatcggtgggtatgaggtatcagaggaggaagaagatgaggaggaagagcagcgctct
gggccaagcgtactaagccaggtccaactgtcagaggacgaggaggacagtgaggatttc
cactccattgctggggacagtgacgtggactctgatgaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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