KEGG   Manis javanica (Malayan pangolin): 108405019
Entry
108405019         CDS       T06054                                 
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108405019 (CNOT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjv03019]
    108405019 (CNOT1)
Messenger RNA biogenesis [BR:mjv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108405019 (CNOT1)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     108405019 (CNOT1)
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 108405019
NCBI-ProteinID: XP_036881120
Position
Unknown
AA seq 2340 aa
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLNTLRRAFLNLDIEGGSIFLKFNFCFSIEECRNI
IMQFGVREVTAAQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTW
NVEVLIDVLKELNPSLNFKEVTYELDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIY
RPWKHAEGQLSFIQHSLINPEIFCFADYPCHTVATDILKAPPEDDNREIATWKSLDLIES
LLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPN
SAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNG
TPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKD
QPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGR
PPSASSLDAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPP
LTTPNQTTAFSGIGGLSSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQ
PTFQQSKMKPSDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRF
KDSTIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALR
YVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQ
QSRDPPVKMQGSITTPGSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTR
PTGVSFKKDVPPSINTTNIDTLLVATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVE
ELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVL
LTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVV
PFVAKVLESSIRSVIFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINE
LKPGNLLKDKDRLKNLDEQLSAPKKDVKQPEELPPITATTTSTTPATSTTCTATVPPQPQ
YSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIA
MTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASA
LRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQE
GRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLA
QPMKQAWATDDVAQIYDKCITELEQHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAI
AALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIE
CRDEYKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSV
AHVTEADLFHTIETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGI
SQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLIT
RFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNT
VTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTL
TAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLA
PFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAF
PRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDL
RSNLQVSNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAV
DLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNR
PHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq 7023 nt   +upstreamnt  +downstreamnt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagataggcatttattacgctgcctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacgaagccaaattttatctcgacgctgtcctatgctattgataatccattgcac
tatcagaagagtttgaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtcatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ttacatctcctcctctcccatctcctctttgggcagaagggagcatttggagttggacag
gaacagatagacgcttttcttaatacgctgcgcagagcatttcttaaccttgatattgag
ggtggtagcatttttctgaagtttaatttctgtttcagtattgaagaatgtcgcaatata
atcatgcaatttggtgttcgggaggtcacagctgcccaggttgcaagagttttgggaatg
atggcacgaactcattcaggattaacagatggaattccattacagagtatctctgctcct
ggcagtgggatctggagtgatggaaaagataaaagtgatggagcacaggcacacacatgg
aatgtagaagtcttgattgatgttctcaaagaactaaacccgagtttgaattttaaggaa
gtaacttacgaactagaccatcctgggtttcaaattcgtgacagtaaaggacttcataat
gtggtttatggcattcagaggggtctgggtatggaagtgttcccagtagatctcatatat
agaccttggaaacatgcagaaggccagctctccttcattcagcattcccttataaaccca
gagatcttctgttttgctgactatccctgtcatactgttgccactgatattttgaaagca
ccaccagaggatgacaatcgagaaattgccacatggaagagcttggatttgattgagtct
ttgcttaggcttgcagaggtggggcagtacgagcaagtcaaacagctcttcagcttccct
atcaaacattgtccagatatgctggtattggccttactacaaatcaacacctcttggcac
accttgcgccatgaactcatctccaccctgatgccaattttccttggaaaccatcctaac
tctgctattattttgcactatgcatggcatgggcagggacagtcaccctcaatccgccaa
cttatcatgcatgcgatggcagaatggtacatgcgaggggagcagtatgaccaggccaaa
ttgtctcgaatacttgatgttgcccaggacttgaaggccttgtcaatgctgctaaatggt
actccatttgcctttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaa
cttgacaaatggctcacagataagattcgagagcatggagagccttttatccaggcatgt
atgacttttttaaagagacggtgcccttctattttgggtggacttgccccagagaaagat
cagcccaaaagcgctcaacttcctccagaaactctggcaacaatgttggcctgtttacaa
gcttgtgcagggagtgtttctcaggagttatcagaaaccatcctcactatggtagccaac
tgcagtaatgttatgaacaaggccagacaaccaccacctggtgttatgccaaaaggacgc
cctcctagtgctagcagcttagatgccatttctcctgttcagattgaccctctcgctgga
atggcatctcttagtataggtggttctgctgcccctcacacccagagtatgcagggtttt
cctccaaatttgggttctgcattcagtactcctcagtcaccagcaaaagcatttccaccg
cttacaaccccaaatcagactactgcattcagtggtattggaggactttcatcccagctt
ccagtaggtggtcttggcacaggcagtctgactggtataggaactggggctcttggactc
cctgcagtgaataacgatccttttgtgcagaggaaactgggcacctctggactgaaccag
cctacattccagcagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggca
aatcagcactttagtaaagagatagatgatgaagcaaacagctatttccagagaatatat
aatcacccaccacatcctaccatgtctgttgatgaggtattagaaatgctacagaggttt
aaagactccaccataaagagggaacgagaagtatttaactgtatgctaaggaacttgttt
gaagaataccggttttttccccagtaccctgataaagagttacatataacagcctgcctg
tttggtgggataattgaaaaaggactggtcacttacatggcactaggtcttgccctgcga
tatgttcttgaagccttacgcaagccttttgggtccaaaatgtattattttgggattgct
gcactagatagatttaaaaacagattgaaggactatccccagtattgtcagcacttggct
tctatcagtcactttatgcaatttccacatcatttacaggagtatatcgagtatggacag
caatctagagaccctcctgtgaaaatgcagggctctatcacaacccctggaagtattgca
ctggctcaggcccaggctcaggcccaagttccagcaaaagctccccttgctggtcaagtt
agcactatggtaaccacctcaacaaccaccactgttgctaaaacagttacagtcaccagg
ccaaccggagtcagctttaagaaagatgtgccaccttctattaatactacaaatatagat
acgttacttgtggctacagatcaaacagagagaattgtagaacccccagaaaatattcaa
gagaaaattgcttttatcttcaacaatctctcacagtcaaatatgacacaaaaggttgaa
gaactaaaagaaactgtgaaggaagaatttatgccttgggtttcacaatatctggttatg
aagagagtcagtattgagccaaactttcacagcctatattcaaacttccttgacactctg
aagaatcctgaattcaataagatggttctgaatgagacctatagaaacatcaaagtgctc
ctgacctctgataaagctgcagccaatttctcagatcgttctttgctgaagaacttggga
cattggctaggaatgatcacactagctaaaaataaacccattttacacactgacttggat
gtaaaatctttgctgctagaggcttatgttaaaggacagcaagagttgctctatgtagtg
ccctttgttgccaaagtcttagagtctagcattcgtagtgtgatttttaggccacccaat
ccctggacaatggcaattatgaatgtattagcagagctacatcaggaacatgatttaaag
ttaaacttgaagtttgagattgaggtcctctgcaagaaccttgcattagacatcaatgag
ctaaaacctggaaacctcttaaaggataaagatcgcctaaagaacttagatgagcaactc
tctgctccaaagaaagatgttaagcagccggaagaactccctcccatcacagccacaaca
acttcaacaacaccagctaccagtaccacctgtacagccacagttccaccacagccacaa
tacagctaccacgacatcaatgtctactcccttgcaggcctggcaccacacattacttta
aacccaacaattccgttgtttcaggcccatccgcagttgaagcagtgtgtgcgccaagca
attgaacgggctgtccaggagctggtccatcctgtggtggatcgatcgatcaagattgct
atgactacttgtgagcaaatagtcagaaaggattttgccctggattctgaggaatctcga
atgcgaatagcagctcatcacatgatgcgtaacttgacagctggaatggctatgattact
tgcagggaacctttgctcatgagcatatctactaacctgaaaaacagttttgcctcagcc
cttcgtactgcatccccacaacaaagggaaatgatggatcaggcagctgctcagttagct
caggacaattgtgaattagcttgctgttttattcagaagactgcagtagaaaaagcaggc
cctgaaatggataagagattagcaactgaatttgagctgagaaaacatgctaggcaagaa
gggcgcaggtactgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaa
atcagactgaaagttggtggtgtggacccaaaacagcttgctgtttatgaagagtttgca
cgcaatgtgcctggcttcctacctacaaatgatttaagtcagcccacaggatttttagct
cagcccatgaagcaagcttgggcaactgatgatgtagctcagatttatgataagtgcatt
acagaactggaacagcacctacatgctatcccaccaactttggccatgaatcctcaagct
caggctcttagaagtcttttggaggttgtggtattatctcgaaactctcgggatgccata
gctgctcttggattgctccagaaggctgtggaaggcttactagatgccacaagtggtgct
gatgctgacctcctgctgcgctacagggaatgccacctcttggtcttgaaagctcttcaa
gatggccgggcttatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaa
tgtcgggatgaatataaatataatgtggaggcagtggaactgctaattcgtaatcatttg
gttaatatgcagcagtatgatcttcacctagctcagtcaatggagaatggtttaaactac
atggcagtggcatttgctatgcagttggtaaaaatcttgctggtggatgaaaggagtgtt
gctcatgttactgaggcagatctgttccacaccattgaaaccctcatgaggattaatgct
cattccagaggcaatgctccagaaggattgccccagctgatggaagtagtgcgatccaac
tatgaagcaatgattgatcgtgctcatggaggccccaactttatgatgcattctgggatc
tctcaagcctctgagtacgatgatcctccaggcctgagggagaaggcagagtatcttctg
agggaatgggtgaacctctaccattcagctgcagctggccgtgacagtaccaaagctttc
tctgcgtttgttggacagatgcaccaacaaggaatcctgaagactgatgacctcataaca
aggttctttcgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggcagag
cagcagcacaatcctgctgctaatcctaccatgatccgtgccaagtgctatcacaacctg
gatgcctttgtccgactcattgcactgctagtgaaacactcaggggaggccaccaatact
gtcacaaagattaatctgctgaacaaggttcttggtatagtagtgggagttctcctgcag
gatcatgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatttttatcatg
ctgctcttggaactcaatgcacctgaacatgtattggaaaccattaatttccagacactt
acagctttctgcaatacattccacatcttgaggcctaccaaagctcctggctttgtgtat
gcctggcttgaactgatctcccatagaatatttattgcaagaatgctggcacatacgcca
cagcagaagggatggcctatgtatgcacagctactgattgatttattcaagtatttagca
cctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaagggtactcta
agagtgctgctggttcttttgcatgatttccctgagttcctttgtgattaccattatgga
ttctgtgatgtgatcccacctaattgtatccagctaagaaatctgatcctgagtgccttc
ccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggatatgttgagt
gaaataaacattgcaccccgtatcctcaccaattttactggagtgatgccacctcagttc
aaaaaggatttggattcctatcttaaaactcggtcaccagttacttttctgtctgatctg
cgcagcaacttacaggtctctaacgagcctggcaatcgctataacctccagctcatcaat
gcactggtgctctatgtagggactcaggccatcgcacacatccacaacaagggcagcaca
ccttcaatgagcacgatcacccattcggctcacatggacatcttccagaacctggctgtg
gacttggacactgaaggtcggtatctgttcttgaatgcaattgcaaatcagctgcggtat
ccaaatagccacactcactacttcagctgcaccatgctatatctttttgcagaggccaac
actgaagctatccaagaacagatcacaagggttctcttggaacggttgattgtaaatagg
ccacatccttggggtcttcttattaccttcattgaattgattaaaaatccagcgtttaag
ttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttattccagtcggtt
gcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacaggtgccagt
tag

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