KEGG   Methanopyrus kandleri: MK0688
Entry
MK0688            CDS       T00078                                 
Symbol
rpb5
Name
(GenBank) DNA-directed RNA polymerase subunit H
  KO
K03053  DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
Organism
mka  Methanopyrus kandleri
Pathway
mka03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mka00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MK0688 (rpb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mka03021]
    MK0688 (rpb5)
Enzymes [BR:mka01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MK0688 (rpb5)
Transcription machinery [BR:mka03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     MK0688 (rpb5)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C EAD1
Other DBs
NCBI-ProteinID: AAM01903
UniProt: Q8TXI5
Position
complement(649995..650273)
AA seq 92 aa
MAERLDPDVVLNHVLVPKHEVIDDEEEIEKILEELGVEKDDLPRIHTNDPVVVALSEKLG
KRIKPGSLVKIVRDSPTAGKTVVYRVVTNPPE
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcggagcggttggatccggacgtggtgttgaaccacgtgctcgtgccgaagcacgag
gtcatcgacgacgaggaggagatcgagaagatactcgaggagctcggggtggagaaggac
gacctgccgaggatccacacgaacgaccccgtggtcgtggcgctgagcgagaaactcggc
aagcggatcaagcccgggagtctggttaaaatcgtccgagacagcccgaccgcgggtaag
accgtggtgtaccgggtcgtgaccaatccgcccgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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