KEGG   Mycobacterium sp. KMS: Mkms_0854
Entry
Mkms_0854         CDS       T00442                                 
Name
(GenBank) ATP-dependent DNA ligase-like protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mkm  Mycobacterium sp. KMS
Pathway
mkm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Mkms_0854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mkm03400]
    Mkms_0854
Enzymes [BR:mkm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mkms_0854
DNA repair and recombination proteins [BR:mkm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Mkms_0854
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABL90069
UniProt: A1UB61
Position
934078..934722
AA seq 214 aa
MASEPPPRRRTLARRVPVRFYVFDVLSVDGRDITRQAYASRRDHLTEIATVSTGCTVQFP
SSFRDTDPATVLAASAELGLEGIVCKHLDSQYTPGLRSRDWIKTPHRLRSEFVVGGWLPG
VGVDHIGAVLVGAYGFAGRLQFCGAVPAGAKCPSAASTYEPVSLLRRRTSPFSDPLPDFI
FPPWPMGDTATDWCGRLPGTEWHSSAPVMEGSSN
NT seq 645 nt   +upstreamnt  +downstreamnt
atggcctcagaaccgccgccccggcgcagaactcttgcgcgtcgggtgcccgttcggttc
tacgtgttcgacgtcctgagtgtcgacggccgggatatcactcggcaggcatacgcgagt
cgacgcgaccacctaaccgagatcgccacagtcagcacgggatgcaccgtgcagtttccg
tcgagcttcagagacaccgatcccgcaaccgtgctcgccgcctcagccgaactgggcctc
gagggcatcgtctgcaagcacctcgattcccagtacacaccggggttgcggtcccgcgac
tggatcaaaacaccgcataggttgcgaagtgagtttgtagtcggcgggtggcttcccggt
gtaggcgtcgaccacatcggcgccgtcttagtgggtgcctatggcttcgcggggcggctg
cagttttgcggggcagtccccgcaggggctaagtgcccgtcagcggcgagtacttatgag
ccagtttccttgctgaggcgcagaacttctccgttcagtgatcctctcccagactttatt
ttccccccatggccgatgggtgacaccgcgactgattggtgcggtcgactaccgggaact
gaatggcattcttcggcacccgtcatggaagggtcttcgaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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