KEGG   Mycobacterium sp. KMS: Mkms_5557
Entry
Mkms_5557         CDS       T00442                                 
Name
(GenBank) DNA ligase (ATP)
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mkm  Mycobacterium sp. KMS
Pathway
mkm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Mkms_5557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mkm03400]
    Mkms_5557
Enzymes [BR:mkm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mkms_5557
DNA repair and recombination proteins [BR:mkm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Mkms_5557
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABL94741
UniProt: A1UPI3
Position
pMKMS01:66747..67733
AA seq 328 aa
MTRASLSPDRLVAPAPMLATLGPAPRGGQFAVEVKFDGQRGILTVDRRVQVTSRNGADIT
ETFPELSAVAAAVGGRRMVLDGEIVAVDEHGRPSFRRLQRRWPQQRRPGAQLVREVPTRF
LAFDVMNIEGEDITHWPYRERRELLDTLMVMESSPALTVPRHWTDVAPADMLAICADQHH
EGIVCKRLDSPYRSGRSRDWIKCPVRATTEAVIVGAFAGHRGEVGTLVLAAHDEAGQLVL
LGQVGTGFSGAERRRLATLLAGTEVSAPPVAVGASMSGVQWFKPRYVGEVAYREYHAGKG
LRHASWKGLRSEPASGVCLPRDAGAAPG
NT seq 987 nt   +upstreamnt  +downstreamnt
gtgacccgcgcatcgttgtcccccgaccgcctcgtggcccctgcgcccatgttggcgacg
ctgggaccggccccgcgcggcggtcagtttgctgtagaggtgaagtttgatggccagcgg
ggaatattgactgttgatcgccgcgtgcaggtgacgtctcgcaatggggcggacatcact
gaaactttccccgagttgtccgccgtcgcggctgcggtcggcggccgtcggatggtcctt
gacggtgagatcgtcgccgtcgacgagcacggccgcccgtcgtttagacggcttcagcgg
cggtggcctcagcagcggcggcccggcgcgcagctcgtgcgtgaggttcccacgcgtttt
ctagccttcgatgtgatgaacatcgagggcgaagacatcacgcactggccttaccgggag
cgccgcgagctgttggacacgctgatggtgatggagagttcgccagcactgacggtgcct
aggcattggaccgatgtcgcgcctgccgacatgctcgctatatgcgctgatcagcaccac
gagggcatcgtgtgtaaacggctggattcgccataccggtcgggccggtcccgggactgg
attaagtgcccagtgcgcgcgacaaccgaggcggtgatcgtgggggcgttcgccggccat
cgcggcgaggttgggaccctggtcttggccgcccacgacgaggcgggacaactcgtgctg
ttgggtcaggtgggcacgggttttagtggtgccgagcgtcgccgtctggccacactgttg
gccgggactgaggtctccgcgccgccggttgcggtgggggcgtcgatgtcgggggtccag
tggttcaagccgcggtatgtcggtgaggttgcctaccgcgagtatcacgcgggcaaaggt
ctgcgccatgcgtcgtggaaggggctgcgttccgagcccgcgtcgggggtgtgtttgccg
cgcgatgccggcgcggcgcccggctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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