KEGG   Mycobacterium kansasii ATCC 12478: MKAN_26640
Entry
MKAN_26640        CDS       T02887                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mkn  Mycobacterium kansasii ATCC 12478
Pathway
mkn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mkn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MKAN_26640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mkn03021]
    MKAN_26640
   03400 DNA repair and recombination proteins [BR:mkn03400]
    MKAN_26640
Enzymes [BR:mkn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MKAN_26640
Transcription machinery [BR:mkn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MKAN_26640
DNA repair and recombination proteins [BR:mkn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MKAN_26640
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGZ53483
UniProt: U5WW64
Position
5843890..5844219
AA seq 109 aa
MSIPQSDAPLAGSASDQFDPASAGIGAYDTPLGITNPPIDELLDRVSSKYALVIYAAKRA
RQINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHADLLEHTEGE
NT seq 330 nt   +upstreamnt  +downstreamnt
gtgagtattccgcagtcagacgcgccgctagccggttccgcctcggatcagttcgatccg
gcatcagccggaattggggcctacgacaccccgctcggcatcaccaacccgcccatcgac
gagttgctggaccgcgtctcgagcaaatacgcgctggtgatttacgcggcgaagcgtgcc
cggcagatcaacgactactacaaccagctcggcgagggcatcctggagtacgtgggtcca
ctggtcgagcccgggttgcaggaaaagccgctatccatcgccctgcgcgagatccacgcc
gacctgctcgagcacaccgagggcgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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