KEGG T05118: MKLM6

Methylomonas koyamae: MKLM6_0535

Entry

MKLM6_0535        CDS       T05118

Name

(GenBank) 2'-5' RNA ligase

K01975

RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]

Organism

mko Methylomonas koyamae

Brite

KEGG Orthology (KO) [BR:mko00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mko03016]
    MKLM6_0535
Enzymes [BR:mko01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     MKLM6_0535
Transfer RNA biogenesis [BR:mko03016]
Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    MKLM6_0535

SSDB

Motif

Pfam:

LigT_PEase 2_5_RNA_ligase2

Other DBs

NCBI-ProteinID:

ATG88810

UniProt:

A0A291IF77

Position

complement(596903..597415)

AA seq 170 aa
MKRLFFALWPDQNTLSACTAICKQLADCGKPVATNNLHVTLLFLGNINAQQQTELTLGAA
KLRNIPTKLVLDRLEFWQKPKVLCLAPGVFDPNFLHFHTELTRIADQSGVITDSRPYRPH
ATLAKKARYKPDLSLKPVIWQSNGFCLAESLSTPSGVEYKILERWHDIDA

NT seq 513 nt +upstreamnt +downstreamnt
ttgaaacgcctgttttttgcactatggcccgaccagaacactctttcagcatgcaccgcc
atttgtaagcaactggccgactgcggcaaaccggttgccacaaacaacctgcacgtcacg
ttactgttcctaggcaacatcaacgcccaacaacaaacagaactcacacttggcgcagcc
aaactcagaaatatcccgaccaagctggtgttggatcgactggagttctggcaaaaaccg
aaagtcctgtgcctggcacccggcgttttcgacccgaatttcttgcacttccataccgaa
ctgaccaggattgctgaccaaagcggcgtcattaccgacagccgaccttaccggccacat
gcgaccctagcaaaaaaagcccgctacaaacccgacttgagcctaaagcctgtcatatgg
caatcgaacggattttgcctggcggaatcgctatctaccccttcgggcgtagaatacaaa
atcctggaacggtggcacgatatcgacgcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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