KEGG   Methylomonas koyamae: MKLM6_1845
Entry
MKLM6_1845        CDS       T05118                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mko  Methylomonas koyamae
Pathway
mko03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MKLM6_1845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mko03400]
    MKLM6_1845
DNA repair and recombination proteins [BR:mko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MKLM6_1845
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MKLM6_1845
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD AAA_30 HEM4 AAA_22 Kinesin
Other DBs
NCBI-ProteinID: ATG90081
UniProt: A0A291IIR6
Position
2013380..2015476
AA seq 698 aa
MSDKRRMEISQSAISGVLAVEEPSVKGKGLQQKPFKIQSRYQPAGDQPAAIRQLVEGIND
GEVHQTLLGVTGSGKTFTIANVIQQTQRPAMIMAPNKTLAAQLYGEMKEFFPENSVEYFV
SYYDYYQPEAYIPASDTFIDKDASLNEHIEQMRLSATKALLERRDTIVVATVSAIYGLGE
PESYFQMVLHLVRGDMIKQRDILRRLAEMQYTRNDIELRRATYRVRGDVIDVFPAESEEQ
AVRIELFDDEIERLSMFDPLTGEVTQRLARFTLYPKSHYVTPRDQLLSAVEKIKLELVER
LAQLREDHKLVEAQRLEQRTLFDIEMIMEVGYCSGIENYSRHLSNRTEGESPPTMFDYLP
KDALVIIDESHVTVPQIGAMYKGDRSRKETLVEYGFRLPSALDNRPLRFEEFERICGQRI
YVSATPGGYEKEHSGAVVEQVVRPTGLVDPIVEVRPATSQVDDLLSEINKRIAVQERVLV
TTLTKRMSEDLTDYLMEHGIKVRYLHSDIETVERVEIIRDLRLGVFDVLVGINLLREGLD
IPEVSLVAILDADKEGFLRSLTSLIQTIGRAARNANGKVILYGDKITRSMQLAIDETERR
RAKQVEFNTQHNIQPRTVFKSVTDILELAIPGSGGSISAARAKVAEPAGDYKALTPKQAA
KALKQLEEKMYQHAKNLEFEDAARIRDQIKLLQAEMSV
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgagcgacaaaaggcggatggagatcagccagtcggcgatatccggcgtactggcagtg
gaagaaccgtctgttaaaggcaaaggcttacagcaaaagccgttcaaaattcaaagccgc
tatcaaccggccggcgaccagcctgcagcgattcggcaattggttgaagggatcaacgac
ggcgaagtgcaccaaaccctgcttggggtgaccggttccggcaagacctttaccatcgcc
aacgtgatacagcagacgcaacggccggcgatgatcatggcgccgaacaaaacgctggcc
gcccagctctacggcgagatgaaggagttttttccggagaacagcgtcgagtactttgtt
tcctattacgactactaccagccggaagcctatattccggcttccgataccttcatcgac
aaggatgcgtcgctgaacgaacatatcgagcagatgcgtttgtcggccaccaaggccttg
ttggaacggcgcgataccatcgtcgtcgccaccgtatcggcgatttacggcttgggcgag
ccggaatcgtatttccagatggtgctgcatttggtgcgcggcgacatgatcaagcaacgc
gacattctgcgccggctggcggaaatgcaatatacccgcaacgatatcgagctacgccgc
gccacctaccgggtgcgcggcgacgtgatcgacgtgtttccggccgaatcggaagaacag
gctgtgcgtatcgaactgttcgacgacgagatcgaacgcctgtcgatgttcgatccgttg
accggcgaagtgacccagcgcctggctcggttcacgctgtacccgaagagccactatgtc
accccgcgcgaccagttgctcagcgcggtcgaaaaaatcaagttggagctggtggagcgg
ctggcgcagttacgcgaagaccataaactggtcgaagctcagcgcctggaacagcgtacg
ctgttcgatatcgaaatgatcatggaagtcggctactgctccggcatcgaaaattactcg
cggcatttgtcgaatcggaccgaaggcgagtcgccgccgaccatgttcgattatctaccg
aaagacgcgctggtcatcatcgacgaaagtcacgtcacggtgccgcagatcggggcgatg
tacaaaggcgaccgttcgcgcaaggaaactctggtcgaatacggattcagattgccctcg
gcgctggacaaccggccgttgcgtttcgaagagttcgaacgcatttgcgggcagcggatt
tacgtatcggccacgccgggcggttacgagaaggaacactccggcgccgtggtggagcaa
gtggtacgtccgaccggtttggtcgatccgatagtggaagtgcggccggccaccagccag
gtcgacgatttgctgtcggagatcaacaagcggattgcagtgcaggaacgggtgttggtg
acgacactgaccaaacgcatgtcggaagatttgaccgattacctgatggagcacggcatc
aaggtcaggtatctgcattcggatatcgagacggtggagcgggtagaaatcatccgcgat
ttgcggctgggcgtgttcgacgtgctggtcggcatcaacctgttgcgcgaggggctggat
atcccggaagtctcgctggtggcgattctggatgccgacaaggaaggttttttgcgttcg
ctgacctcgttgatccaaaccatcggccgcgccgcgcgtaatgccaacggtaaagtgatt
ttatatggcgacaaaatcacccgctcgatgcaattggccatcgacgaaaccgagcgtcgc
cgggcgaagcaggtcgagttcaatacgcagcataatattcagccgcgcaccgtattcaaa
tcggtcaccgacattctggaactggccataccgggttccggcggttcgatcagcgccgcc
cgcgccaaggtggcggaaccggccggcgactacaaagcgttgacgccgaagcaggcggcc
aaggcgctgaagcaactggaagagaagatgtaccagcacgccaagaatctggaattcgag
gatgctgcccgcatccgcgaccaaatcaaactgctgcaggcggaaatgtcggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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