KEGG   Methylovirgula ligni: CWB41_10505
Entry
CWB41_10505       CDS       T05824                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mlg  Methylovirgula ligni
Brite
KEGG Orthology (KO) [BR:mlg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mlg03016]
    CWB41_10505 (rnd)
Enzymes [BR:mlg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CWB41_10505 (rnd)
Transfer RNA biogenesis [BR:mlg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CWB41_10505 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: QAY96106
Position
complement(2173340..2174518)
AA seq 392 aa
MSLITTNRDLADASRRLASHPFITVDTEFLRETTFWPQLCVVQLASPEEAIAVDALAEGI
DLSPVFALMADPKIVKVFHAARQDIEIIWNLARLIPAPLFDTQVAAMVCGYGDQIAYGEL
VQAVCKVALDKSSRFTDWSRRPLSEAQVTYAIADVTYLRDIYLALHKRLESTGRLSWLDD
EMAQLTSPDVYEQHPERAWERFRGRARRPRDLAVLMELAAWREAEAQSRDVPRGRVLKDD
ILIEVAAAAPRTADELSNLRAFPRGMERSRAGTDILAAIQRGLARDPKTLPKIERERRNG
NGATVELLKVLLRQVSEAHDVAAKMIATVEDLETLAATPRAKIPALTGWRYEIFGAKALE
LIDGRLALTLEKGKVVTLEWQDTPESAAAAAR
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgagcttgattacgacgaatcgcgacctggcggacgcctcccgccgcctggcatcccac
cctttcatcacagtcgacacggaattcctgcgggaaacgacgttctggccccagctctgc
gtcgtgcagctggcctcgcccgaagaagcgatcgccgtcgacgcccttgccgaaggcatt
gatctttctccggtttttgccttgatggcagacccgaagatcgtcaaggtctttcatgcc
gcccggcaagacattgagatcatttggaatctcgcccgcctgatcccggcgccgctgttc
gacacgcaggtcgccgcgatggtctgcggctacggcgaccagatcgcctatggcgaactc
gtccaggcggtctgcaaggtggcgctcgacaaatcctcgcgctttaccgactggtcgcgg
cgccccttgtcggaggcgcaggtcacttacgccatcgctgacgtgacctatctgcgcgat
atctacctggcgctgcacaagcggctcgaatcgaccggacggctgtcctggctcgacgac
gaaatggcacagctcacgtctcccgacgtctatgagcagcatccggagcgggcctgggag
cggtttcgcggccgggcgcggcgcccgcgcgacctcgccgtgctgatggagcttgccgcc
tggcgcgaggcggaagcccagagccgtgacgtgccgcgcggccgcgtgctgaaggacgat
atattgatcgaggtcgccgctgcggcgccgcggacggcggacgagctcagcaatctgcgc
gccttcccgcgcggtatggagcgctcgcgtgccggcaccgatattctcgccgctatccag
cgcggcctcgcccgcgacccgaaaaccttgccgaagatcgaacgcgagcggcgcaacggc
aatggcgcgacggtcgagctcttgaaagtcctgctgcgtcaggtcagcgaggcgcatgac
gtcgccgcgaaaatgatcgccacagtcgaagaccttgaaactctggccgccacgccgcgc
gctaaaattccggcgctgacaggctggcgctacgagattttcggcgcaaaggcgctcgaa
ctgatcgacggccgcctggcgctgacgctcgaaaaaggcaaggtcgtcacgctcgaatgg
caggacacgccggagagcgcggccgcggcggcgcggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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