KEGG T02444: MULP

Mycobacterium liflandii: MULP_00005

Entry

MULP_00005        CDS       T02444

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing), B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

mli Mycobacterium liflandii

Brite

KEGG Orthology (KO) [BR:mli00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mli03032]
    MULP_00005 (gyrB)
   03400 DNA repair and recombination proteins [BR:mli03400]
    MULP_00005 (gyrB)
Enzymes [BR:mli01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MULP_00005 (gyrB)
DNA replication proteins [BR:mli03032]
Prokaryotic type
  DNA Topoisomerases
   MULP_00005 (gyrB)
DNA repair and recombination proteins [BR:mli03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MULP_00005 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c

Other DBs

NCBI-ProteinID:

AGC60149

UniProt:

L7V3Z3

Position

5231..7309

AA seq 692 aa
MTGPRASNPEENIRTVAAQKKKAQDDYGASAITVLEGLEAVRKRPGMYIGSTGERGLHHL
VWEVVDNSVDEAMAGYATQVNVRLLDDGSVEVADNGRGIPVAMHATGAPTVDVVMTQLHA
GGKFGGENSGYNVSGGLHGVGVSVVNALSTRLEVDIERDGYEWSQFYDRAQPGTLKQGEA
TKKTGTTIRFWADPDIFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTPDEVVDDVV
SDTAEAPKSAQEKAAESTAPHKVKSRTFHYPGGLVDFVKHINRTKSPIQQSIVDFEGKGS
GHEVEIAMQWNGGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDKKLLKDKDP
NLTGDDIREGLAAVISVRVAEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPSEA
KTIVNKAVSSAQARLAARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSA
GGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDLSKLR
YHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRTEPEFAYS
DRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAA
ADELFSILMGEDVDARRSFITRNAKDVRFLDV

NT seq 2079 nt +upstreamnt +downstreamnt
gtgactggaccgcgcgcatccaaccccgaggagaacattcggaccgtggctgcccagaag
aagaaggcacaagacgactacggcgcttcggcgatcaccgttctcgaaggcctcgaggcc
gtccgtaaacgccccggtatgtacatcgggtccaccggtgagcgcggtctgcaccacctg
gtgtgggaggtcgtcgacaactcggtggacgaggcgatggccggctacgccacccaggtg
aacgtgcggctgctcgatgacggcagtgtcgaggtcgctgacaacggccgaggcattccg
gtcgcgatgcacgccaccggcgccccgaccgtcgacgtcgtcatgacccaactgcacgcc
ggcggcaagttcggcggcgagaacagtggttacaacgtcagtggtggtctgcacggcgtg
ggtgtgtcggtggtcaacgcgctgtccacccgactggaagtcgacatcgagcgcgacgga
tacgagtggtcgcagttctacgaccgcgcccagccgggcaccctcaaacagggcgaggca
accaagaagaccggaaccaccatccggttctgggccgacccggacatctttgagaccacc
gaatacgacttcgagacggtggcgcggcgcctgcaggagatggcgttcctcaacaagggc
ctgaccatcaatctcaccgacgagcgggtcaccccggacgaggtcgtcgacgacgtcgtc
agtgataccgccgaagcaccaaagtccgcccaggagaaggccgccgaatcgaccgcgccg
cacaaggtcaagagccgcaccttccactatcccggcggtttggtcgatttcgtcaagcac
atcaaccgcaccaagagtcctattcagcagagcatcgtcgacttcgagggcaagggctcc
ggccacgaagtcgaaatcgcgatgcagtggaacggtggctactccgagtcggtgcacacc
ttcgccaacaccatcaacacccatgagggtggaacgcacgaagaaggcttccgcagtgcg
ttgacctcggtggtgaacaagtacgccaaagacaagaagctgctcaaggacaaggacccc
aacctcaccggtgacgacatccgcgaggggttggccgcggtcatctcggtgcgggtggca
gagccgcagttcgagggtcagacaaagaccaagctgggcaacaccgaggtcaagtcgttt
gtccagaaggtttgcaacgagcagctcacccactggttcgaggccaatccttcggaagcc
aaaaccattgtgaacaaggcggtctcctcggcgcaggcacgtctcgccgcgcgcaaggcg
cgagagttggtgcggcgcaagagcgcaaccgatctcggtgggctgcccggtaagttggcc
gactgccgctcgacagatccgcgcaagtcggaactgtatgtggtggagggtgactccgcc
ggcggctcggcaaagagtggccgcgattcgatgttccaggcgatcctgccgctgcgcggc
aagatcatcaatgtcgaaaaggcacgcatcgaccgagtcctgaaaaacactgaagtccag
gcgatcatcaccgcgttgggtaccggtattcacgacgaattcgacctctcgaagctgcgc
tatcacaagatcgtcttgatggccgacgccgacgtcgacggccaacacatctccacgttg
ttgttgaccctgttgttccgcttcatgcgtccgctgatcgagaacggccacgtgttcctg
gcacagccgccgctgtacaagttgaagtggcagcgcaccgaacccgagttcgcctactcc
gatcgggagcgcgacggcctcctcgaggctgggctcaaagccggcaagaagatcaacaag
gaagacggcattcagcgttacaaaggtctgggcgagatggacgccaaggagctgtgggaa
accacgatggacccatcggttcgggtgctgcgccaggtgaccctcgacgatgcggcggcc
gccgacgaattgttctccattctgatgggcgaagacgtcgatgcacgccgcagctttatc
acccgtaatgccaaagacgttcggttcctggacgtttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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