KEGG   Mycolicibacterium litorale: B1R94_20885
Entry
B1R94_20885       CDS       T05032                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
mll  Mycolicibacterium litorale
Pathway
mll03030  DNA replication
mll03430  Mismatch repair
mll03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1R94_20885
   03430 Mismatch repair
    B1R94_20885
   03440 Homologous recombination
    B1R94_20885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mll03032]
    B1R94_20885
   03400 DNA repair and recombination proteins [BR:mll03400]
    B1R94_20885
Enzymes [BR:mll01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B1R94_20885
DNA replication proteins [BR:mll03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B1R94_20885
DNA repair and recombination proteins [BR:mll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B1R94_20885
SSDB
Motif
Pfam: RNase_T DUF2510 Rv2179c-like Tic110 BRCT TerB DNApol_Exo DUF3759 DZR_2
Other DBs
NCBI-ProteinID: AQT81185
Position
complement(4393504..4395108)
AA seq 534 aa
MSAGWYDDPWIQADLRWWDGREWTGRIAHAAPNVDSVFPSAPPVGTGIEHLIGRGGSIAV
IDVETTGVYNVDRIVEIAILTMDCDGRIHDEFETLVQPLRDVGPTWKHGVDAAMVHGAPL
FADIAHHVASRLDGAVIVGHNVSFDMRMIGNELTSAGIDIEWGKALDTIRAVGGCSLGRA
CEQRGIELMDAHRAIADARATARLLFATREFYSVACRPATARPLQVTPLRVLAREGHVEV
LPPAPYLSALARGVHTSIDVAPYVQLLDVAIADLQLTTDERKALQDLASGLGLDAQAVAR
AHREFMSGLIDAALEDQVVTDTEYDQLFRAAALLDVDLDLVQSRIDPYRAMTDEMTLAPG
LTVCFTGQGELNGALVDRPSQERMAQQHGLIVVKSVTRKGPDLLVAADRDSRSGKARKAR
QSGIAVCSFSDFALALKSGEPVRVSRIASHGVPVVCVGCGSSWMAPRAAVGALCADCSRT
VLLERRPAATKRVPAAGGSLSVVVLVCNGCGVQWERTRGRGRRPTHCPDCVAQE
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgtcggcaggctggtacgacgacccgtggattcaggctgacctgcgctggtgggacggt
cgtgagtggaccggacgcattgcgcatgcggcgcccaatgtcgattcagtcttcccgtca
gcaccaccggtggggaccggcatcgagcacctcatcggccggggtggctccattgccgta
atcgatgtggaaacgactggcgtgtacaacgtcgatcggatcgtcgagattgcgatcctc
acgatggattgtgacggccggattcacgatgagttcgagaccctcgttcaaccgctccgg
gatgtcggcccgacatggaagcacggcgtcgacgccgcgatggttcacggggcgcctctg
ttcgctgacattgcgcatcatgtcgcctctcggctcgatggagcggtcatcgtcggccac
aacgtcagcttcgatatgcgcatgatcggcaacgagcttacgagcgccgggatcgacatc
gagtggggcaaggctttggacaccatcagagctgtcggtggctgcagcctcgggcgggcc
tgcgagcagcgcggcatcgagttgatggacgcgcaccgtgctatcgccgacgctcgcgct
actgcgcgcttgctgttcgcaacgcgtgagttctattccgttgcatgcagacccgcgacg
gctcgacctctacaggtcacgccgctgcgcgttctggcgcgagaaggtcatgtcgaagtt
ctgcctcccgcgccgtacctatcggctttggctcggggagtgcatacaagtatcgacgtc
gctccatacgttcaattgctggatgtcgcaatcgctgacttgcagttgacaacggacgaa
cgaaaggcattgcaggatctagcgtctggtctcggtctcgatgcccaggcagtcgcacgt
gcgcatcgagaattcatgagcggtctcattgacgccgccctcgaagatcaggtcgtgacc
gataccgaatacgaccaactattcagagcagcagcccttctcgatgtcgatctggatctg
gttcagagccgaatcgacccatatcgtgccatgaccgacgaaatgaccctcgctccaggc
ttaaccgtgtgctttaccggacaaggcgaactcaatggagccttggtcgatcgtccgtct
caggaaagaatggcacagcaacacggactcattgtcgtgaagtctgtaacgaggaagggg
cctgacctccttgttgcggcagatcgtgattcccgctcgggaaaagcccgtaaagcccga
cagtcggggatcgccgtttgcagcttttcagactttgcgctagcgctcaaatctggtgaa
ccggtgcgagtctcgcgcatcgcctcccatggtgtaccggtcgtgtgcgtaggttgcggc
tcctcgtggatggcgccgcgtgccgcggtcggtgcgctgtgcgccgactgttcccggacg
gtgctattggagcggaggccggcggcgactaaacgcgtaccggcggccggaggctcgcta
tcggtagtggtgttggtatgcaatggttgcggagtgcagtgggaacggacgcgaggcaga
ggacgccggcccacccattgccctgattgtgtggcacaggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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