KEGG   Mesorhizobium japonicum MAFF 303099: mlr8425
Entry
mlr8425           CDS       T00043                                 
Name
(GenBank) integration host factor alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
mlo  Mesorhizobium japonicum MAFF 303099
Brite
KEGG Orthology (KO) [BR:mlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mlo03032]
    mlr8425
   03036 Chromosome and associated proteins [BR:mlo03036]
    mlr8425
   03400 DNA repair and recombination proteins [BR:mlo03400]
    mlr8425
DNA replication proteins [BR:mlo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    mlr8425
Chromosome and associated proteins [BR:mlo03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    mlr8425
DNA repair and recombination proteins [BR:mlo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      mlr8425
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: BAB54309
RhizoBase: mlr8425
UniProt: Q982Z7
Position
6920509..6920832
AA seq 107 aa
MGGKTLTRADLAEAVYRKVGLSRTESAELVEAVLDEICEAIVRGETVKLSSFATFHVRSK
NERIGRNPKTGEEVPILPRRVMTFKSSNVLKNRILRSHQNSKAKGGK
NT seq 324 nt   +upstreamnt  +downstreamnt
atggggggaaagacacttacgcgtgccgacctggcggaggccgtctaccgcaaggtcggc
ctgtcgcgcactgaatccgccgaactggtcgaagccgtgctggacgaaatctgcgaagcc
atcgtgcgtggcgagacggtcaagctgtcgtccttcgcgacgttccatgtccgctccaag
aacgagcgcatcgggcgcaatcccaagaccggtgaagaggtgccgatcctgccgcgccgg
gtgatgacgttcaaatcgtccaacgtgctgaagaaccgcatcttgcgctctcaccagaac
agcaaggccaagggcggcaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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