KEGG   Marinobacter sp. LQ44: ASQ50_04245
Entry
ASQ50_04245       CDS       T04470                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
mlq  Marinobacter sp. LQ44
Pathway
mlq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mlq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    ASQ50_04245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlq03400]
    ASQ50_04245
Enzymes [BR:mlq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     ASQ50_04245
DNA repair and recombination proteins [BR:mlq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     ASQ50_04245
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ASQ50_04245
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ASQ50_04245
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AMQ87951
UniProt: A0A142FN92
Position
complement(900862..902310)
AA seq 482 aa
MIRSFYWHDYETFGVDPVHDRPSQFAGVRTDADLNVIEDPLVIFCKPTDDYLPSPEACLI
TGITPQKALEDGFPEAEFIAQINEAFSQPGTCAVGYNSLRFDDEVTRHTLYRNLRDPYAR
EWQNGNSRWDIIDMVRLTYALRPEGINWPKKEDGSPSFKLEELTVANGIAHEAAHDAMSD
VLATIAVAKLIKEKQPKLFEFVLNNKDKHSARQMLDTAAMKPVFHISAKYPATRGCCALV
APVAESLSNKNQVIVYDLREDPTELINATVEQIRERVFTSQAELGEGVSRFPLKGVQLNK
CPVLAPANMLSTLSPERLAELELDGDVLRANLAKLRQAPDLPGRIAQAFEQDFAGSDLTD
PDEQLYAGGFISKTDREKLNWLLTQPADTLGEQDVSFEDARLPDMLFRYRARNYPGTLSG
EDMERWEEFRSQRLMHPKKGWRSLEEYGRILQKLAADPELTPQKQQILEDLHLYGESLIP
YM
NT seq 1449 nt   +upstreamnt  +downstreamnt
ttgatccgttctttctactggcacgattacgaaaccttcggtgtggacccggttcatgac
cgcccctctcagttcgccggcgttcgcaccgatgccgatctgaacgtgatcgaagatccg
ttggtgatcttctgcaagccgacagacgattacctgccttccccggaagcctgtttgatt
actggtattactccgcagaaagcgctggaagacggctttccggaagcggaattcatcgcc
cagatcaacgaagccttcagccagcccggcacctgcgccgtgggctacaacagcctgcgt
tttgatgacgaagtcacccgccacaccctgtaccgaaacctgcgtgatccttacgcccgg
gaatggcagaacggcaactcccgttgggacatcatcgacatggtgcgcctgacctacgcc
ctgcgcccggaaggcatcaattggccgaagaaagaagacggcagccccagcttcaagctg
gaagaattgacggtggctaacggcattgcccacgaggcagcccacgatgctatgtctgac
gtgctggccaccatcgccgtggccaagctgatcaaagagaagcagcccaagctgtttgag
tttgtgctgaacaacaaagacaagcactccgcccggcaaatgctggacaccgccgccatg
aaaccggtgttccatatttctgccaagtacccggccacccgtgggtgctgcgccctggtg
gcgccggtggcggaaagtctgagcaacaagaaccaggtgattgtgtacgacctgcgggaa
gaccccactgaactgatcaacgccaccgtggagcagattcgtgagcgggtatttacgtca
caggcagagctgggtgagggcgttagccgcttccccttgaaaggtgtgcaattgaacaag
tgcccggtgctggccccggccaacatgctgtcaaccctgtcgccggaacggctggcggaa
ctggagctggatggcgacgtgctgcgcgccaacctggccaaactgcggcaagcgccagac
ctgccaggccgcatcgctcaagccttcgagcaggatttcgccggcagcgacctgaccgac
ccggacgaacaactctacgccggtggcttcatcagcaaaaccgatcgggagaaactgaac
tggctgttaacccagccggcagataccctgggcgagcaagacgtgagcttcgaagacgca
cgcctgccagacatgctattccgctaccgcgcccgcaattacccgggcaccctgagcggc
gaagacatggaacgctgggaagaatttcgcagccaacgcctgatgcatcccaagaaaggc
tggcgctccctcgaagagtacggccgcatcctgcaaaaactcgccgccgacccggaactc
accccccagaagcagcagatcctggaagacctccacctctacggcgaatccctcatcccc
tacatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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