KEGG   Melampsora larici-populina: MELLADRAFT_28617
Entry
MELLADRAFT_28617  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
mlr  Melampsora larici-populina
Pathway
mlr03022  Basal transcription factors
mlr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MELLADRAFT_28617
  09124 Replication and repair
   03420 Nucleotide excision repair
    MELLADRAFT_28617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlr03021]
    MELLADRAFT_28617
   03400 DNA repair and recombination proteins [BR:mlr03400]
    MELLADRAFT_28617
Transcription machinery [BR:mlr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MELLADRAFT_28617
DNA repair and recombination proteins [BR:mlr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MELLADRAFT_28617
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4 zf-RING_5 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_4 DZR_2 zf-rbx1 TRAF3_RING ZNF512_C2H2 DUF3797
Other DBs
NCBI-GeneID: 18927021
NCBI-ProteinID: XP_007416794
JGI: Mellp1_28617
UniProt: F4S620
Position
Unknown
AA seq 171 aa
CPICKSDRYLNPDLRLLVSKCYHKMCESCIDRIFSLGPEPCPTCGLILRKSNFSPQTFEN
LKVEKEVIIRKRIHKLFNKRREDFESLDHYNNYLEEVEDITFNLINGVDVAETEAKIKKY
QIENEDLIAQNAVHEARQVELNKRQEEAIKREREERKAELIRLEGEAQREE
NT seq 513 nt   +upstreamnt  +downstreamnt
tgtcctatctgtaaatcagatagatatcttaatcctgatctacgtctcttggtttcgaaa
tgttatcataaaatgtgtgaatcatgtattgatcgaattttttcattaggaccagaacca
tgtccaacttgtggtttgattttaagaaaaagtaatttctcacctcaaacttttgaaaat
ttaaaagtagaaaaagaagtgattatacgaaaacgaattcataaattgtttaataaacgt
cgagaagatttcgaaagtttagatcattataataattatttagaagaagttgaagatatc
acttttaatttgattaatggagtagatgtagcagaaacagaagctaagattaaaaaatat
caaatcgaaaatgaagatctgattgctcagaatgcagtacatgaagcaagacaagtcgaa
ttaaacaaacgacaagaagaagctattaaaagagaacgcgaggaaagaaaagctgagttg
attagattagaaggagaagctcaaagagaagaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (41)   

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