KEGG   Melampsora larici-populina: MELLADRAFT_46659
Entry
MELLADRAFT_46659  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
mlr  Melampsora larici-populina
Pathway
mlr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MELLADRAFT_46659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlr03019]
    MELLADRAFT_46659
   03036 Chromosome and associated proteins [BR:mlr03036]
    MELLADRAFT_46659
Messenger RNA biogenesis [BR:mlr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     MELLADRAFT_46659
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     MELLADRAFT_46659
Chromosome and associated proteins [BR:mlr03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    MELLADRAFT_46659
SSDB
Motif
Pfam: DEAD Helicase_C CMS1
Other DBs
NCBI-GeneID: 18928363
NCBI-ProteinID: XP_007404630
JGI: Mellp1_46659
UniProt: F4R5J1
Position
Unknown
AA seq 542 aa
MATSTNPHPGDQDWKSKLNLPQKDLRPQTEDVTKTKGVEFEDLYLRRDLLMGIFEAGFER
PSPIQEEAIPIALAGRDILARAKNGTGKTGAFVIPSLEKTNVKLNRIQALILVPTRELAL
QTSQVCKTLGKHTGIQIMVTTGGTTLKDDILRLQETVHIVVGTPGRILDLAGKGVADLSQ
CKTFVMDEADKLLSPEFTVVIEQLLSFLHKERQVMLFSATFPMIVKDFKDKHMVKPYEIN
LMEELTLQGVTQYYAFLEERQKVHCLNTLFSKLQINQAIIFCNSTNRVELLARKITDIGY
SCFYSHAKMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYL
HRIGRSGRFGHRGIAINLITYENRFDLYRIEQELGTEIQPIPAVIDKALYVAPGIEDTPA
PTSKRQQQSASSTNAAQHANANTNNRGPQDSRNNRQANQSQPSSNPSQPHDKPTLPPQQL
TFQKAAPIDSLSHATPTEYASGLPPSHNRNNHHKVGRGGGGGHRGRGSGSGHRHPSGATP
VA
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggctacttcaacaaatcctcatccgggcgatcaagactggaagtcgaaactcaatcta
cctcaaaaagatctacgtcctcaaacagaggatgtcaccaagactaaaggtgtcgaattc
gaagacctgtatcttcgtcgcgatttgctaatgggaatcttcgaggctggatttgaacga
ccgtcgcccatccaagaagaagctattcccatcgcccttgcaggtagggatatccttgct
cgtgctaaaaatggaaccggcaaaaccggagcttttgttatcccttctctcgaaaagact
aatgtcaagttgaaccgtatacaagccctcattcttgtgcccacccgtgaactcgcactc
caaacgtctcaagtctgtaaaacgctcggaaaacacactggtatccagatcatggtcaca
accggaggaaccacactaaaagacgacatcttgcgtcttcaggagactgtccatattgta
gtgggaactcctggaaggatactcgatttggccggaaaaggagttgcagacctcagccaa
tgcaagacttttgtaatggatgaggcagacaagctactaagtcccgaattcacagtcgtc
attgaacaacttctgtcgtttttacacaaagagaggcaggtcatgctcttctccgctact
ttccctatgatagtcaaagatttcaaagataagcatatggtgaagccctatgaaatcaac
ttgatggaggagttgactctccagggtgtaacacaatattatgcctttttggaagaacga
cagaaagttcattgtctaaatactttattctcaaaactgcaaatcaatcaagccatcatt
ttttgcaattcaaccaatcgtgttgaacttcttgctcgcaaaatcacagatataggttat
tcttgtttttattctcatgccaaaatgttgcaacaacaccgaaatcgggtgtttcacgat
ttcagaaatggggtttgccgtaatctcgtatgttctgatctcctcacaagaggaatagat
attcaggctgtaaatgtcgtcatcaacttcgattttccgaagaatgccgagacctatcta
catcgaattggtaggtcaggtagatttggacatcgtggtatagctatcaatcttatcacc
tatgaaaaccgatttgatctttaccgtatcgaacaagaactcggaactgaaatacaacct
atacccgcggtgattgataaagctctatatgtcgcacctggtattgaggacactcctgct
cctacatcgaagcgtcaacagcaatcagcatcctccacaaacgctgctcaacatgccaat
gccaataccaacaatcgaggcccccaagattctcgcaacaatcgccaagccaatcagtcc
cagccgagctcaaacccctcccagcctcatgacaagcctacattaccccctcaacaactg
acttttcagaaagcagccccgattgattctttgtcccatgcaacaccaacagagtatgct
agtggcctaccaccctcgcacaatcgaaataatcaccataaagtgggacgaggcggtgga
ggtggtcatcgaggtcgcggtagtggtagtgggcataggcatcccagtggtgccacgcct
gttgcctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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