KEGG   Mycolicibacterium madagascariense: MMAD_23330
Entry
MMAD_23330        CDS       T06841                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mmag  Mycolicibacterium madagascariense
Pathway
mmag00300  Lysine biosynthesis
mmag00470  D-Amino acid metabolism
mmag01100  Metabolic pathways
mmag01110  Biosynthesis of secondary metabolites
mmag01120  Microbial metabolism in diverse environments
mmag01230  Biosynthesis of amino acids
Module
mmag_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mmag00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MMAD_23330 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MMAD_23330 (dapF)
Enzymes [BR:mmag01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MMAD_23330 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: BBZ28038
UniProt: A0A7I7XFS2
Position
2419124..2419993
AA seq 289 aa
MMFAKGHGTENDFVVLPDVEARLALTPGAVAALCDRRRGLGADGVLRVTTADAALAAGVL
DRIPEGVAADDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLERRDEFVVGSLAGPRPV
VLHAVDATSADVTVDMGKANPFGTGSAVVGGRRFGGVAVDVGNPHLACVDAALTDADLAA
LDVAAPVSFDTALFPDGVNVEVLTAPVDGAVTMRVHERGVGETRSCGTGTVAAAVAALGH
LGARTGALTVRIPGGEVTVTVTDATSFLRGPSVLVAHGELADAWWRAQQ
NT seq 870 nt   +upstreamnt  +downstreamnt
gtgatgttcgccaagggacacggcacggagaacgacttcgtcgtgctgcccgacgtcgag
gcccgcctggcgctgacccccggggcggtcgctgcgctgtgcgaccgacgccgcggtctc
ggcgccgacggcgtcctgcgggtcaccacggccgacgcggcactggcagccggggtgctc
gaccggattcccgagggcgtggcggccgacgactggtacatggactaccgcaacgccgac
ggttcggtcgcgcagatgtgcggcaacggcgtcagggtcttcgcccactacctgagggcc
agtgggctcgaacggcgcgacgagttcgtggtggggtcgctggccggaccgcggccggtc
gtcttgcacgcggtcgacgcgacgtcggccgacgtcaccgtcgacatgggcaaggccaac
ccgttcggtacgggatcggccgtcgtcggcggccgacgcttcggcggtgtcgccgtcgac
gtcggaaatccccacctcgcctgcgtcgacgcggcgctgaccgacgccgacctggccgcg
ctcgacgtcgccgcgccggtgtcgttcgacaccgcgctgttccccgacggggtcaacgtc
gaggtgctgaccgcacccgtcgacggggccgtcaccatgcgcgtgcacgagcgcggcgtc
ggcgaaacccgttcgtgcggaacgggaaccgtcgcagcggcggtggcggcgctgggacac
ctgggcgcccggacgggggcgctgacggtgaggatccctggtggcgaggtcaccgtgacc
gtgaccgatgccaccagcttcctgcgcggaccgtcggtattggtggcgcacggcgagttg
gccgacgcctggtggcgcgctcagcagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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