KEGG   Methylocaldum marinum: sS8_1195
Entry
sS8_1195          CDS       T05638                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
mmai  Methylocaldum marinum
Pathway
mmai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    sS8_1195
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mmai02044]
    sS8_1195
Secretion system [BR:mmai02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   sS8_1195
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical T2SSJ nSTAND3 CHASE5 AAA_22
Other DBs
NCBI-ProteinID: BBA33157
UniProt: A0A250KNK6
Position
complement(1349222..1352794)
AA seq 1190 aa
MRLFVKAVINFFKKKWVIQAIGMIALCALIWFIGPLIAIAGSAPLESELARGLTMAAAVV
IWVIWRLVAEIRAGRRDQQLVKDLAEPREETEAKSAEAAAVDENIELLTENFSKALKLLR
ETRGAKQHLYELPWYVIIGPPGSGKTTALLNSGLKFPLADRLGSKPIRGVSGTRNCEWLF
TEEAVLIDTAGRYTTQESYQAVDAAEWAGFLKLLKEHRPRRPINGVLVTLSLSDLLQHTE
EERALHARAVRQRVQELYSALGIRFPIYVLFTKCDLVAGFNDFFADLTQEERAQVWGETF
PEDGSGQPVDVLARFAAGYDELLQRLSRRMHSRIQDERDVQRRSLILDFPQQMALLKPPM
ERFLEDAFGANRFETRPLLRGVYLTSGTQEGTPIDRVMGLLAATFRISRQTVPIFSGRGR
SFFLTRLLKEVIFPEAELAGLDPRVERKRRLIQAGTYASVLVLALACIVLWMVSFQRNTS
AIEQVEQEIERYRAASVDASDWQSSLRTLIPKLDPLLSVSDIYENTGGMAHFGLYQGEKI
RVAANHAYEHWLRDYFLPVNLQRLAQRMTGPEASNPDILYELLRVYLMLGQPEHMDARIA
GPWIRSDWESHFGTEPDLLARLSLHLDNLFKLRLDPQPLDEVLVSGVRAKLSQVPQTIQL
YARFKNESQLDRTHDFKLGQVLGPDGGRVFVAADGRDVGTLAVPGLFTAYGYSELFLKKS
LEFVKEAVNENWVLGKQATLDLPEIQRLHGDFQKLYLTDYQKTWSKLLSSIKLRRPRDIN
QTIEWLEILSRPANPVRPLLEGVEKNTSLTKIASLTAQLLNKVPAVAEASVDDRTRKLLD
AARQAETGGDPEIDPVQTVEAAFEDLNYLVRSSADRPAPLDSTLKTVASLRDYMLQIGSA
ALSGEQALRSASGRVGGEGGDVLLQAKSEFGRLPEPLKSWFLSFLTVGWRQTLAGAKGEL
NSMLKTGVGSPCRAAFSGRYPFVRSSSKDATLMDFAKFFAPNGVLDQFFQTNLKTFVDVN
RPVWTEVGMDNQSLGLSPTTIRQFQHASAIRSAFFSAGGQMPTVSFTLKPISLDQNVATF
RFNLDGQEVVYRHGPEQVSRLQWPGPSGGPGVRVVFEAVDGRQVSRSKEGSWALFRLLDE
ALVEKTDLPERFRVTFQVDGYRARYELRAGSVTNPFGLAALKSFSCPDAL
NT seq 3573 nt   +upstreamnt  +downstreamnt
gtgaggttattcgtgaaagccgtaatcaatttcttcaagaaaaaatgggttattcaggcg
atcgggatgatcgctctctgcgctctgatctggttcataggtcccctgatcgcgattgcg
ggttccgcgcccctggagtccgaattggcgcgcggcttgactatggcggcggcagtcgtg
atctgggtgatctggcgcctggtggcggaaatccgggcaggacgcagggaccagcagctg
gtaaaggatcttgccgagccgagggaagaaacggaggcgaaatccgccgaagcggcggcg
gtcgacgagaatatcgaactgctgaccgagaacttctccaaggctctgaagctgctccgg
gagacgcgcggtgccaagcagcacctgtacgaactgccttggtatgtcattatcggacct
cccggatcgggcaagaccaccgctttattgaattcaggactcaaatttccgctggccgac
cggttgggttcaaagcccatccgcggcgtcagcgggacacggaattgcgagtggctgttc
accgaagaggccgtgctgatagacaccgcaggacgctacaccacccaggaaagttatcag
gccgtcgatgcggcggaatgggccggatttctcaagctgttgaaggaacatcgtccgcgc
cgcccgatcaacggcgtgctggtaaccttgagtctgtcggatttgctgcaacacacggag
gaagagcgcgcgctgcatgctcgcgccgtacgccagcgggtccaggaactgtattcggcg
ctagggattcgtttccccatctacgtgctgttcacgaaatgcgatttagtggcgggattc
aacgacttcttcgccgatctcacccaggaggaacgtgcccaggtatggggcgagaccttc
cccgaagacggctccggccagccggtggacgtactggcgcgattcgccgccggctacgac
gaactgcttcagcgcttgagccggcgtatgcacagccgcatccaggatgagcgggatgta
cagcggcgtagtttgattctcgattttccgcaacaaatggcacttctgaaaccgccaatg
gagcgttttctggaagacgcattcggggcgaaccggtttgaaacccggccgttgctgcga
ggcgtttatctaaccagcggcacccaggaaggaacccccatcgatagggtcatgggctta
ctggccgccaccttccggatcagccgccagacggtgccgatcttcagcggcagaggcaga
agtttctttctgactcgactgctgaaagaagtcatcttccccgaagccgaactggcgggc
ctcgatccgcgcgtcgagcggaaaaggcgtctgattcaggccgggacatacgcatccgtg
ctggttttggcgctggcgtgcatagttctgtggatggtaagttttcagcgaaatacctcg
gcaatcgaacaggtagaacaggagatcgaacgctaccgcgccgccagtgtcgatgcgagc
gactggcaatccagtctccgtactttgattcccaagcttgatccgctattgtcggtctct
gacatctacgaaaataccggtggaatggcgcatttcggcctttatcaaggcgaaaaaatc
cgagtcgccgcgaatcatgcctacgagcactggctccgtgattatttcctcccggtgaat
cttcagcgtctggctcagcgcatgaccggcccggaggcgtccaatccggacattctgtac
gagcttctgcgcgtttacctcatgctcggtcagcccgaacatatggacgccaggatcgcg
gggccgtggatccggagcgattgggaaagccacttcggaaccgagccggatttgctggcc
cgattgagtctgcatctggataatcttttcaagttgcgactcgacccacagcctttggat
gaagtcctggtctccggcgtccgggcaaagctatcccaagtaccgcagacgatacagctg
tatgcccgattcaagaatgaatcgcagctggatcgtacgcatgatttcaaactcgggcag
gtgctcggacccgacggcgggcgggtgttcgtggcggccgacggacgagacgtcggaact
ctggcggtaccgggtctattcacggcttacggttattccgagttgtttctaaagaagagc
ttggaattcgtcaaggaggcggtgaacgagaattgggtgctgggcaaacaggcgaccctg
gatttgcccgaaattcagcgcttgcacggggatttccaaaagctctacctgaccgattac
cagaagacatggagcaagcttctgagcagcataaagctgaggcgccccagggacatcaat
caaaccatcgagtggttggaaatcctgtcccgtccggccaatccggtgcgccccctgctg
gaaggcgtcgaaaaaaacacctcgttgaccaagatcgcttcgcttaccgcgcagcttctc
aataaagtgccggctgtcgccgaggcgagtgtagacgatcgtacgcgaaaactgttggat
gccgcgcgccaggcggagaccggcggtgatcccgagatcgatccggttcaaaccgtagag
gcggcgttcgaagatctcaactatctggtgcggagcagtgcggatcgacctgctcccctg
gattcgaccctgaaaaccgtagcctccctgcgcgattatatgttacaaatcggcagcgca
gcgctcagcggcgaacaagcgctgagaagcgcatcaggacgggtagggggtgaaggcgga
gatgtgctcctccaggcaaaatccgagttcgggcgtttgccggaacccttgaaaagctgg
tttctgtcgtttctgaccgtaggctggaggcaaaccttggcgggagcgaaaggtgagctg
aatagcatgctcaaaactggagtcggctcaccgtgcagggctgctttcagcggtcgctac
ccattcgtgagaagcagttccaaggatgcgacgcttatggactttgccaagtttttcgct
ccgaacggcgtgctggatcagttttttcaaaccaatttgaaaacattcgtggacgtaaac
cgcccggtgtggacggaagtcggtatggataaccaatccttgggtctttccccgacaacc
attcggcaattccagcacgcttctgccattcgttcggcgtttttttcagcgggaggtcag
atgcctaccgtttctttcaccttaaaaccaatttctttggatcaaaacgtggcgacgttt
cgcttcaaccttgatggacaggaggtcgtttatcggcacggcccggaacaagtctcacgc
cttcagtggccaggcccttccggtgggcccggggttcgagtggtgttcgaggccgtggac
ggaaggcaggtcagccgctccaaggagggcagctgggctctttttcgactgctggatgaa
gccctggttgaaaagaccgatcttcccgagcggttccgggtcacttttcaagtggacgga
taccgcgcacgctatgagttacgggctggcagtgtgacgaatccgttcggtctcgcggcc
ttgaagtccttcagttgcccggatgcgctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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