KEGG   Methylocaldum marinum: sS8_3063
Entry
sS8_3063          CDS       T05638                                 
Name
(GenBank) pseudouridine synthase
  KO
K06175  tRNA pseudouridine65 synthase [EC:5.4.99.26]
Organism
mmai  Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmai03016]
    sS8_3063
Enzymes [BR:mmai01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     sS8_3063
Transfer RNA biogenesis [BR:mmai03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    sS8_3063
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: BBA35006
UniProt: A0A250KTZ4
Position
complement(3371100..3371849)
AA seq 249 aa
MELLYQDDFIVAVNKPAGLLVHRSAIDRHETRYAMQIVRDRLGRRVYPVHRLDKPTSGVL
VFALDADTARRMTELFSQSAVEKTYLAVVRGYTAETGTIDYALAEQSDRMTDAKALRDKP
AQPAVTGYRRLGAAELPFAVGRYPTARYSLLRVFPKTGRKHQIRRHMKHIFHPVVGDTSH
GDGRHNEFFRVHFACFRLLLCATDLAFTHPATGEKLHLEATPDDSFRRIVDNLGWAGLLN
KVPEFVGIR
NT seq 750 nt   +upstreamnt  +downstreamnt
atggaattactctatcaagacgacttcatcgtggcggtgaacaagcctgccggcctgctc
gtccaccgcagcgcgatcgatcgccacgaaacccgctatgccatgcagatcgttcgcgac
cggcttgggcgccgggtgtatccggtccatcgcctggacaagccgacctcgggcgtattg
gtgttcgcgctcgatgcggacaccgcgcggcggatgacggagctgttctcccaaagcgcc
gtcgagaagacctatctcgcggtggtccgcggctatactgcggaaaccggaaccatcgat
tatgcgctggcggaacaatccgaccgtatgaccgacgccaaagccttgcgcgacaaaccg
gcccagcctgcggtaacgggctaccggcggctgggagccgcggaactgccgttcgcggtg
ggacgttatccgaccgctcgctattcgctgttgcgggttttccccaagaccgggcggaaa
caccagatccggcgccacatgaagcatatttttcatccggtggtgggcgataccagtcat
ggcgacgggcgccacaacgaatttttcagggtccatttcgcctgcttccgcctgctgctc
tgcgcaaccgatctcgccttcacccatcccgcaacgggcgagaagctgcatctggaagcc
accccggatgattcttttcggcgtatcgtcgacaatttgggctgggccgggcttttgaac
aaggtcccggaattcgtgggtatcagataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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