KEGG   Methylocaldum marinum: sS8_4352
Entry
sS8_4352          CDS       T05638                                 
Name
(GenBank) RNA polymerase, sigma subunit, ECF family
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mmai  Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmai03021]
    sS8_4352
Transcription machinery [BR:mmai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     sS8_4352
SSDB
Motif
Pfam: DUF6596 Sigma70_r4_2 Sigma70_r2 TPR_21 TPR_8 TPR_2 TPR_7 TPR_12 TPR_1 TPR_14 TPR_11
Other DBs
NCBI-ProteinID: BBA36282
UniProt: A0A250KXF4
Position
complement(4718224..4719567)
AA seq 447 aa
MSFSNDNGAERVRETVDAVYRSDSRRVFATLVRLLGDFDLAEEALHDAFRAALEQWPKQG
VPANPRAWLVSAGRFKAIDNLRRSARFVALPEDAAERPDSDDPTERDDAHFEHGAASLTE
LAERSAVGVVDPAFWDEDAVEDDRLRLIFTCCHPALAPDAQVALTLREVCGLTTEEIARA
FLAAPPTLAQRIVRAKAKIRDARIPYQVPAREDLPERVDAVLRVIYLVFNEGYSASLGGS
VTRHDLSEEAIRLVRLLIELLPEPEAQGLLALMLLHESRRAARTSPRGELILLDEQDRRL
WNRNRIEEGCALVERALSSRRFGPYTLQAAIAAVHAEAADAAETDWAQIVGLYDFLLRAE
PSPVVELNRAVAVAMRDGPAAGLVLIDAILARGDLKDYHLAHAARADLCRRLGRASEARA
AYQRALGLTRQEPERRFLERRLNALPD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtccttctcgaacgacaacggcgctgaacgggtacgcgagacggtggacgccgtctac
cgttccgattcgcgccgcgtgttcgccaccctggtgagattgctcggcgacttcgacctt
gccgaagaagcgctgcacgacgccttcagggcggcactcgaacagtggccgaaacaaggc
gtgccggctaatccgcgggcatggctggtttccgcgggccgcttcaaggccatcgacaac
ctgcgccggagcgcccggttcgtcgctttgccggaagacgcggccgaacggcccgacagc
gacgaccccacggaacgggacgacgcgcatttcgaacacggtgccgcctcgctgaccgaa
ctcgccgaaaggagcgctgtcggcgtcgtcgatcccgccttttgggatgaagacgcggtc
gaagacgaccggctgcggctgatcttcacctgctgccatccggccctggcgccggacgca
caggtcgcgctcaccttgcgcgaagtctgcggccttaccacggaagagatcgctcgcgcc
ttcctcgccgcgccgcccacgctggcccagcgcatcgtgcgcgccaaggccaagatccgc
gatgcccgcattccctatcaggtaccggcacgggaggatctgccggagcgtgtggatgcg
gtgctgcgcgtcatctacctggtgttcaacgagggttactccgcctcgctgggcggatcc
gtgacgcggcacgatctgtcggaggaagccatccgcctcgtaaggctgctgatcgaactg
ctgccggaacccgaagcgcaaggcctcctggcgctcatgctgctgcacgaatcacgccgc
gccgcgcgcacctcgcccaggggcgaactgatactgctcgacgagcaggaccgaagactt
tggaaccggaatcggatcgaggaaggctgcgccctggtggagcgcgcgctgtcgtcgcgc
cggttcggcccgtatacgctgcaggcggcgatcgcagccgtgcatgccgaagcggctgat
gccgccgaaaccgactgggcccagatcgtcgggctctacgatttcctcctgcgcgccgaa
ccgtcaccggtagtggaactgaaccgcgccgtagcggtggcgatgcgggatggccccgcc
gccggtctcgttctgattgacgcaatactggctcgcggcgatctcaaggattatcacctg
gcgcatgccgcccgcgccgacctgtgccgacgcttggggagagcttcggaagcccgcgcc
gcctaccagcgggcgctcggcctgacacggcaggaaccggagcggcggtttctcgagcgg
agactgaacgcgctgccggattga

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