KEGG   Methylocaldum marinum: sS8_5350
Entry
sS8_5350          CDS       T05638                                 
Name
(GenBank) BirA bifunctional protein
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
mmai  Methylocaldum marinum
Pathway
mmai00780  Biotin metabolism
mmai01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    sS8_5350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmai03000]
    sS8_5350
Enzymes [BR:mmai01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     sS8_5350
Transcription factors [BR:mmai03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    sS8_5350
SSDB
Motif
Pfam: BPL_LplA_LipB HTH_11 BPL_C HTH_24 HTH_AsnC-type HTH_23 MarR MarR_2 HTH_Crp_2 HTH_29 Rrf2 HTH_38 TrmB GntR HTH_PafC TetR_N NUMOD1
Other DBs
NCBI-ProteinID: BBA37269
UniProt: A0A250L3C5
Position
5758919..5759908
AA seq 329 aa
MQYDALTRTLLQLLSDNGFHSGAELARRLGVSRTVIWKTVRALQQRGIEIAALSGKGYRV
TQPVELLDETAIQSSLSSEAARLIGALHIYDELDSTNTRLMRLAAEGAPSGAICLAETQT
AGKGRTGRSWLSPLGANVYLSVLWRFDDHSLVAGLSLAVGVAAIRALDRVGVGGVGLKWP
NDLLWEDLKLGGILLEVSGEAHGGCAVIVGLGVNRYIPPAVGSGIDQAWVDLATVAGASA
PSRNRLVASILSELLPLLNDYRRTGLEPYLPEWRRRHRLTGRAVVVHQGDRETVGTVTDV
TAEGLLVLTCKDGKRREFASGDVRLRIAR
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagtacgatgcgctgaccaggaccctccttcaattgctgtccgataacggctttcac
tcgggagcggagctggcgaggcggctcggcgtcagcagaacggtgatatggaagacggtt
cgtgccctgcaacagcgagggattgaaattgccgccttgtcggggaaaggctatcgcgtt
acgcagcccgtcgaattgctcgatgaaaccgcaatccagtcctcattgagttcggaagcc
gctcgactcatcggggcactgcacatttacgacgaactggattcgaccaatacccgcttg
atgcgtcttgctgccgagggggcaccctccggcgctatctgcctggcggaaacgcagacc
gccggcaagggacgtaccggccgatcctggctttcgcccctgggcgcgaatgtttatctc
tcggtcttgtggcgtttcgacgaccactcccttgtagccggtctcagcctggcggtcgga
gtcgctgcgattcgtgccctagatcgggtcggcgtcggcggggtgggactcaagtggccg
aacgatctattgtgggaagatctcaagctgggtgggatattgctggaagtgagcggggag
gctcatggcggatgcgccgtcatcgtgggcttgggtgtcaaccgatatatcccccctgcc
gtcgggagcgggatagatcaggcatgggtcgatctcgcgaccgtggcgggagcatccgcc
ccttcgcggaaccgcctggttgcttcgatattgagcgagcttttgcctttgctgaacgat
tatcggcgcaccgggctcgagccctatcttccggagtggcgccgccggcatcgtttgacg
gggcgcgccgtggtggtccaccaaggtgatcgggaaaccgtgggcacggtcacggatgtt
acggccgagggattgctggtcttgacgtgcaaggacggcaagcgccgcgagttcgcgtcg
ggcgacgtgcggctccggattgcccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (36)   

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