KEGG   Methylocaldum marinum: sS8_5388
Entry
sS8_5388          CDS       T05638                                 
Name
(GenBank) Holliday junction DNA helicase ruvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
mmai  Methylocaldum marinum
Pathway
mmai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    sS8_5388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmai03400]
    sS8_5388
DNA repair and recombination proteins [BR:mmai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     sS8_5388
    RecFOR pathway proteins
     sS8_5388
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH RecR_HhH HHH_3 HHH_8 IMS_HHH DUF3173
Other DBs
NCBI-ProteinID: BBA37307
UniProt: A0A250L0B8
Position
5797982..5798578
AA seq 198 aa
MIGFLRGVVVAKKPPSLLLDVRGVGYEIDAPMSTFYKLPDIGEEVTLYTHLAIREDAHNL
FGFVSETERALFRSLIRVSGVGAKLALAILSGLSVEEFHRCVEAQDAARLVRLPGVGKKT
AERLIIEMRDRLPELPTVHLPGAGILPTPTASPVDDAVSALIALGFKPQDANSLVRKVSV
DGKSSEEIIRSALQSAAK
NT seq 597 nt   +upstreamnt  +downstreamnt
atgatcggatttttgcgcggcgtggtggtggccaagaaaccgccttctcttttgttggac
gtgcgcggggtggggtacgagatcgatgcgcctatgtcgaccttttataagttgccggac
atcggtgaagaagtgacgctgtacacccatctggcgatccgggaggatgcccacaacctg
ttcggcttcgtgtccgagacggagcgtgctctgtttcgcagcctgattcgagtcagcggg
gtcggggcgaagctagccctggccattctgtcgggcttgagcgtcgaggagttccaccgc
tgcgtggaagcgcaggacgccgcccggctggtgcgcctgcccggagtcggcaagaagacc
gcggaacgcttgatcatcgaaatgcgcgaccgcttgccggaactgccgaccgttcacctg
ccaggagccggaatcttgcctacgcccacagcgagtccggtggacgatgcggtcagcgcg
ttgatcgccctggggttcaagccgcaggacgccaacagtttggtgcggaaggtatcggtc
gacggcaagagcagcgaagagatcatccggtcggccttgcagtcggcagcgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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