KEGG   Mycobacterium marseillense: CKJ54_19780
Entry
CKJ54_19780       CDS       T05049                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
mmal  Mycobacterium marseillense
Brite
KEGG Orthology (KO) [BR:mmal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmal03009]
    CKJ54_19780
   03016 Transfer RNA biogenesis [BR:mmal03016]
    CKJ54_19780
Enzymes [BR:mmal01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CKJ54_19780
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CKJ54_19780
Ribosome biogenesis [BR:mmal03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CKJ54_19780
Transfer RNA biogenesis [BR:mmal03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CKJ54_19780
SSDB
Motif
Pfam: PseudoU_synth_2 DUF1648
Other DBs
NCBI-ProteinID: ASW91858
UniProt: A0A854IBB1
Position
complement(4250648..4251508)
AA seq 286 aa
MRPAPLPVRDGLGPARVRLRGGPVLAELSARFGARARAKVLAGEVVGADGAVIDAATVLP
AGASVYLYRELPDEVPVPFEIPVLHRDDDIVVVDKPHFLATMPRGRHVAQTALVRLRREL
GLPELSPAHRLDRLTAGVLVFTARREVRGAFQTLFSRGLVRKTYLARAAVEPALRLPRVV
ESRIVKRRGQLQAICEPGAPNAETLVELLSADGLYRLTPRTGRTHQLRVHMASLGIPIEG
DPLYPNVIDVAVDDFSTPLRLLARRIEFTDPRTGERREFVSRRVEP
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgagacccgccccgcttcccgtgcgcgacgggctcggcccggcccgggtgcggctgcgg
ggtggcccggtgctggccgagctgagcgcccgcttcggcgcgcgggcccgcgccaaggtg
ctggccggggaggtggtgggtgccgacggcgcggtgatcgatgccgccaccgtgctgccc
gccggggcgagcgtctacctctaccgcgagctgcccgacgaggtgccggtgccgttcgag
atcccggtgctgcatcgcgacgacgacatcgtggtcgtcgacaagccacactttttggcc
accatgccgcggggacgccacgtcgcgcagaccgcgctggtgcggctgcgccgcgagctg
gggctgccggagctgagcccggcgcaccggctggaccggctgaccgccggggtgctggtg
ttcaccgcgcgccgcgaggtgcgcggcgcgttccagacgctgttctcgcggggtctggtg
cgcaagacgtatctggcccgggccgccgtcgagccggcgctgcggctgccccgcgtggtg
gaaagccgcatcgtcaaacgccggggtcaactgcaggcgatctgcgagccgggtgcgccc
aacgccgagaccctggtcgagctgttgagtgcggacgggctctaccggctgaccccccgc
accggacgcacccaccagctacgcgtgcacatggcctcgctgggtataccgatcgaaggg
gatccgttgtaccccaacgtgattgacgtagcggtcgacgacttcagcacgccgctgcgg
ttgttggcgcggcgcatcgagttcaccgacccgcgcaccggcgagcgccgcgagttcgtc
agccgccgagttgagccgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system