KEGG   Mycobacterium sp. MCS: Mmcs_3551
Entry
Mmcs_3551         CDS       T00367                                 
Name
(GenBank) ribonuclease, Rne/Rng family
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mmc  Mycobacterium sp. MCS
Pathway
mmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mmcs_3551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmc03019]
    Mmcs_3551
   03009 Ribosome biogenesis [BR:mmc03009]
    Mmcs_3551
Enzymes [BR:mmc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Mmcs_3551
Messenger RNA biogenesis [BR:mmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Mmcs_3551
Ribosome biogenesis [BR:mmc03009]
 Prokaryotic type
  rRNA processing factors
   Mmcs_3551
SSDB
Motif
Pfam: RNase_E_G IF2_N PCB_OB
Other DBs
NCBI-ProteinID: ABG09658
UniProt: A0A5Q5BMM5
Position
complement(3777806..3780781)
AA seq 991 aa
MADSENTQAQDSPDSSEEASPRERLPERLRVHSLARVLGTTSRRVLDALAELDGRARSAH
STVDKTEAERVREVLAGSDGDAPVEAPAPAEIAESVADAPEVVIETVESVEVTIDVAPVG
DTSDVPEPEDEPESRTILETAPVERADYLPLFVAPQPVRFEPADEDDDEDEDDDVAASAD
SEDDDEDDQSERPAARRRRRGRRGRGRGRGEQSDDNGEPDAAEGTETKTDGQADSDQDTG
DDSDEDGDEDTSGGDGSSRRRRRRRRRKSGASDDSDNGSPDDPPNTVVHERPPRERGGKS
GDSDDNEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERVMVVRDKV
RTEPPHEGARYTQIAVLEDGVVVEHFVTSPASASLVGNIYLGIVQNVLPSMEAAFVDIGR
GRNGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGR
YLVYVPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTASEGVKEDDIRSDVNRL
QERWTQIEAKAAEITAKKAGAAVALYEEPDVLVKVIRDLFNEDFSGLIVSGDEAWNTINS
YVESVAPDLMPRLTKYEPAGNPNGEGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRT
EAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESN
RDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTPCPHCAGRGIVLH
GDPIDNASGNGRKSEPGTGRRSKRGKKGGKPEEAPAAVPVIKVPPHPAGEHPMFKAMAAA
NGRDDESEDESDESADEQSGAREDDTAEKVHEAVGEELDDEDFEDAEDAEDSDDSDEDED
EDEDEDSDDSDEDEIDLDNDDDEEDDDIEVLDDEDSDEDEDSDEDEDSDEDSDEDSDEDS
DDEDEPEVIAVPVRRPRRRAAARPAGPPSSE
NT seq 2976 nt   +upstreamnt  +downstreamnt
gtggccgacagtgaaaatactcaagcccaagactcgccggactcttcagaagaggcttcg
cctcgcgaaagacttcccgaacgcctgagggtgcactcactggcccgggtgctgggcacc
accagccggcgggtcctcgacgcactggccgaactcgacggccgcgctcgcagcgcgcac
tcgaccgtcgacaagaccgaggccgagcgggtccgcgaagtgctcgccggcagcgacggg
gacgcccccgtcgaagccccggcgcccgcggagatcgccgagtcggtcgccgatgccccc
gaggtggtcatcgagacggtcgagtcggtcgaggtcacgatcgacgtggctcccgtcggc
gacacctctgacgtgccggaacccgaggacgagccggaatcgcggacgatcctcgagacg
gcccccgtcgagcgggcggactacctgccgctgttcgtcgcaccccagccggtgcggttc
gagcccgccgacgaggacgacgacgaagacgaggacgacgacgtcgccgcgtcggccgac
agcgaggacgacgacgaggacgaccagtcggagcggcccgccgcgcggcgccgccggcgg
ggacgccgcggccggggccgggggcgcggcgaacagagcgacgacaacggggagcccgac
gccgccgagggcaccgagacgaagaccgacggacaggccgactccgatcaggacaccggc
gacgactccgacgaggacggcgacgaggacacctcgggtggcgacggcagttcgcggagg
cgtcgccgccggcgtcggcgcaagtccggcgcgtcggacgactccgacaacggttcaccc
gacgacccgccgaacaccgtcgtgcacgaacgcccgccgcgtgagcggggtggcaagtcc
ggcgacagcgacgacaacgagatccagggcatcagcggctcgacccggctggaagccaag
cggcagcgccgtcgcgacggtcgggacgccggacgccgccgcccgccgatcctgtcggag
gccgagttcctcgcccgccgcgaggccgtcgaacgcgtcatggtggtgcgcgacaaggtc
cgcaccgaaccgccccacgagggtgcgcgctacacccagatcgcggtgctcgaggacggg
gtcgtcgtcgaacacttcgtgacgtcgccggcctcggcgtccctggtcggcaacatctac
ctgggcatcgtgcagaacgtgctcccgtcgatggaggccgcgttcgtcgacatcggtcgc
ggtcgcaacggcgtgctctacgccggtgaggtgaactgggaggccgcgggtctcggcggg
cagaaccgcaagatcgagcaggcgctcaaacccggcgactacgtcgtcgtgcaggtcagc
aaggatccggtcgggcacaagggtgcccgcctgaccacgcaggtgtcgctggccggccgt
tacctggtgtacgtgccgggtgcgtcgtcgaccgggatcagccgcaagctgcccgacacc
gagcggcaacggctcaaggagatcctgcgcgaagtggtgcccgccgacgccggcgtgatc
atccgcaccgcgtcggagggcgtgaaggaagacgacatccgctccgacgtgaaccggttg
caggagcgctggacacagatcgaggccaaggccgccgagatcaccgcgaagaaggccggc
gccgccgtcgcgctctacgaagagcccgacgtgctggtcaaggtgatccgcgatctgttc
aacgaggacttctccgggctgatcgtctcgggtgacgaggcgtggaacaccatcaactcc
tacgtcgagtccgtggcgcccgacctgatgccgcggctgaccaagtacgaaccggcaggc
aaccccaacggcgagggtccggacgtgttcgccgtgcaccgcatcgacgaacaactcgcc
aaggccatggaccgcaaggtgtggctgccgtcgggcgggacgctggtcatcgaccgcacc
gaggcgatgaccgtcgtcgacgtcaacaccggcaagttcaccgggtcgggcggcaacctc
gagcagacggtcacccgcaacaatctcgaagcggccgaggagatcgtgcgccaactgcgg
ttgcgcgacatcggcggcatcatcgtcatcgacttcatcgacatggtgctcgagtcgaac
cgcgatctggtgttgcggcggctgaccgaggcgctggcccgtgaccgcacccgccaccag
gtgtccgaggtgacctcgctgggtctggtgcagctgacgcgtaagcggctgggcaccggg
ctgatcgaggccttctccaccccgtgtccgcactgtgcggggcgcggcatcgtgctgcac
ggcgatccgatcgacaacgcctcgggtaacgggcgcaagtccgagccggggacgggcagg
cgcagcaagcgcggcaagaagggcggtaagcccgaggaggcgcccgcggccgtgccggtg
atcaaggtgccgccgcaccccgccggtgagcacccgatgttcaaggcgatggccgccgcg
aacggccgcgacgacgagtccgaggacgagtccgacgagtcggccgatgagcagtccggt
gcgcgcgaggacgacaccgccgagaaggtgcacgaggccgtcggtgaagaactcgacgac
gaggacttcgaggacgcggaggacgcggaggactccgacgattccgatgaggatgaggat
gaggacgaggacgaggattccgacgactccgatgaggacgagatcgacctcgacaacgac
gacgacgaagaggacgacgacatcgaggtcctcgacgacgaggattccgacgaggacgag
gattccgacgaggacgaggattctgacgaggattccgacgaagactccgatgaggactcc
gatgacgaggacgaacccgaggtgatcgcggtcccggtgcggcgtccgcgccgacgcgcc
gccgcacgtccggcgggtccgcccagcagcgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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