KEGG   Marinomonas mediterranea: Marme_1971
Entry
Marme_1971        CDS       T01449                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mme  Marinomonas mediterranea
Pathway
mme03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Marme_1971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mme03400]
    Marme_1971
Enzymes [BR:mme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Marme_1971
DNA repair and recombination proteins [BR:mme03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Marme_1971
    RecFOR pathway proteins
     Marme_1971
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 AAA_16 TIP49 AAA_3 nSTAND3 Sigma54_activat Mg_chelatase RNA_helicase AAA_14 Sigma54_activ_2 NTPase_1 AAA_17 Rad17 AAA_18 ATP-synt_ab AAA_28 AAA_24 NB-ARC ABC_tran TsaE AAA_11
Other DBs
NCBI-ProteinID: ADZ91219
UniProt: F2K2T6
Position
2155540..2156556
AA seq 338 aa
MIEQDRIISSETQGSESQVDRAIRPQMLDEYIGQPIVREQMEIFIQAARQRSEPLDHTLI
FGPPGLGKTTLANIVANEMGADIKTTSGPVLERAGDLAALLTNLEDGDVLFIDEIHRLSP
AIEEVLYPAMEDYQLDIMIGEGPAARSIKIEIPPFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYDVQSLTTIVGRSASKMGVVLDESGCFEVARRSRGTPRIANRLLRRVRDVAQVGGEK
VVGEKVARRALDMLSVDSQGFDHLDRRMLLTMIEKFDGRPVGLDSIAAAVGEDKDTIEDV
IEPFLIQQGFVIRTPRGRQVTKRAYEHFNYQLPSEDFK
NT seq 1017 nt   +upstreamnt  +downstreamnt
ttgatagaacaagatcggattatttcttcagaaactcagggtagtgagtcacaggttgat
cgtgctattcgaccgcagatgctcgatgagtacattggtcagcccattgttcgagaacaa
atggaaatttttattcaagcggcgcgtcaacgttcggagccgcttgaccataccttaatt
ttcggaccaccagggttgggtaaaacgacgcttgctaatattgtcgcaaatgagatggga
gcggacataaaaacaacgtcgggaccggttttagagagggcaggcgatttggcggcactg
cttactaatctcgaagatggtgatgtattatttattgacgaaattcatcgtcttagtcct
gctattgaagaggttctttatcccgcaatggaagactatcagttagatattatgattggt
gaggggcctgcagctcgttctataaaaatcgaaattcctccgtttactttagtcggtgcc
acaactcgtgccggcctgcttacctctcctttaagagatcgatttggaatagtgcaacgt
ttggagttttatgatgtccaatcgttgacgactattgttggtcgttctgctagcaaaatg
ggcgttgttctggatgaaagtggttgctttgaggtggcaagacgatctcgcggtacaccg
cgtattgccaaccgattgttgcgtcgggtgagggatgtcgctcaagtgggcggcgaaaaa
gtagtaggggaaaaggttgctcgtcgggccctagatatgttaagtgtagatagtcaaggt
ttcgatcatcttgatcgacgtatgttattgactatgatagagaagttcgacggacgtccg
gtaggtttggatagtattgccgcggcagtcggagaagataaagatacgatcgaagatgtg
atcgagccgtttctaattcagcaggggtttgtgattagaactccgcgtggaaggcaggtc
acaaagcgtgcttacgagcactttaattatcagttaccgtcagaagattttaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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