KEGG   Marinomonas mediterranea: Marme_3665
Entry
Marme_3665        CDS       T01449                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
mme  Marinomonas mediterranea
Pathway
mme03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mme00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Marme_3665
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mme02044]
    Marme_3665
Secretion system [BR:mme02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Marme_3665
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 nSTAND3 AAA_22 bpMoxR Sigma54_activat AAA_14 AAA_7 Zeta_toxin AAA_18 AAA_24 RNA_helicase IstB_IS21 AAA_30 TniB T2SSE NACHT SRP54 NTPase_1 TsaE AAA_25 Rad17 AAA_6 Clp_N
Other DBs
NCBI-ProteinID: ADZ92877
UniProt: F2JVY9
Position
complement(4045630..4048554)
AA seq 974 aa
MDSQTLKVLIDKLSPLCGRALEAAAGFANSRGHREIVPEHLLLKLLEESEVKGEASHLSC
VLSYFSVDQNTLWQQLVDNVNQQRVLHDSKAVLSSELYELLERACLNFTLRMPSKASWVR
QSDTVGIDSLSILESFIQISSNWPHYRSYDALRSINLDILKANVSEITVRSNEYEVDHFD
QSISNSNDVGNVSLTEHGQGVGSGSAHSPRAIDRFTTDLTIKAKNGELDPISGRHKEIRK
AIDILCRRRKNNPILVGEPGVGKTAVVEGLAQRIVDGDVPEFLKGKHIHVLDLGLLQAGA
SVKGEFEKRLKQVIDEVGSSDEIMLFIDEAHTLVGAGGEAGLADAANLLKPALARGELRT
VAATTWSEYKQYFERDPALARRFQMVKVEEPTLDAAKHMLTQIKEKYEQHHDVSITDEAI
EAAVELSDRYVSGRFLPDKAIDLIDTAAARVKMGQAVLPQTLEGLQAKALYIEDRIAGLE
KELDQGLESNMDLHHELKDEQQQVLLEISDLKESWDKQNHLVEEIQRSVENAENDEESKH
RAYSLRKLLQEEQESSSAGLCIQAEVNATSIADVIADWTGIPVGSMVRDDLQNLLTFDAA
LGEDIIGQDGAIRAIGQSLRANKAKLRFTEGPQGVFLLAGPSGVGKTETAKKIAKHLFGS
ERSLITINMSEYQEAHTVSQLKGSPPGYVGYGQGGLLTEAVRQKPYSVVLLDEVEKAHVD
VMNVFYQVFDQGIMRDGEGREIDFKNTIILMTSNLGSELIMEAMSDRNENSESDDVDLSF
SENETLKSDDSVANSAITDVSGGGNERDSSDDDKGENDDGKIEYTPPSTLELEALIQPTV
AQHFAPALAARMQIVPFVSLNEESLKAIVTHKLDKLAERLMSEYKMELRCDESALDMLLS
LCQESHAGARLINQRIESLLSSRIANEILHYLVESDLPDILQMTASENGTIDVVFLDKQA
GGQQNALLDDSIEA
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggacagtcaaacactgaaagtcttgatcgacaagttaagcccattatgtggtcgagcg
ctggaagccgccgccggttttgcaaactctagaggacacagagaaatcgttccggaacac
ctgttgctaaagctactagaagaaagcgaagtaaagggcgaagccagtcatctatcgtgt
gtattgagctacttttcagtcgatcaaaatacgttatggcagcagcttgttgataatgtg
aatcagcaaagagtgcttcatgacagtaaagccgttttgtcttccgagctatatgaacta
ctcgaacgcgcttgtttgaattttacactgcgcatgccatcaaaagcttcttgggttcgc
caaagcgataccgtcggtattgattcattgagcattcttgaaagctttattcaaatctcc
tctaactggcctcactatagaagttacgatgcgctgagaagcattaacctagatattctg
aaagcaaatgtcagtgagatcactgtacgctcaaacgaatacgaggtggaccatttcgat
caaagtatctctaacagtaacgatgtggggaatgtgagtttaaccgaacatggtcagggc
gtaggttcgggttctgctcactctccaagagccatcgatcgatttacaacagacctgacg
atcaaggctaaaaacggtgaattagatcccatcagcggccgccataaagagattcgaaaa
gccattgatatcctctgtcgtaggcgaaaaaataaccctattttggttggtgagccgggt
gtcggtaaaacggcggtcgttgaagggctagcgcaacgcattgtcgacggagatgtgcct
gagttcttaaaaggtaagcatatccacgtacttgatttaggtttgttgcaagcgggtgca
agcgttaaaggagagttcgaaaagcgtctaaagcaagtgattgacgaagtgggaagctcc
gatgagatcatgttattcatcgatgaagctcatactttggtgggagccggcggtgaagct
gggcttgccgatgccgcaaatctattaaagccagccttagctcgcggtgagttgagaacc
gttgcggcgacgacgtggtctgaatataagcagtactttgaacgagatcccgctctggcg
cgccgcttccagatggttaaagtggaagaacccacattggatgctgccaagcacatgctg
acgcaaattaaagagaagtacgagcagcatcatgatgtcagcattacagacgaagcaatt
gaggcggcagtcgaactgtcagatcgttatgtgagtggacgttttcttccagataaagcg
atcgatttaattgatactgccgctgcccgtgtgaaaatgggtcaggccgttttgcctcaa
accctagaaggacttcaagcaaaagcgctttatattgaagaccgaatagcagggctagag
aaggagctcgaccaagggctcgaaagcaatatggatttacaccacgagttaaaagatgaa
caacagcaagtcctgttggaaatatccgatctaaaagaaagttgggataagcaaaaccac
cttgtcgaagaaattcaacgctcagttgaaaatgcggaaaacgacgaggaaagtaagcat
cgtgcatactctttgagaaagctgttacaggaagaacaagagtcgtcatcggcaggctta
tgtatacaggcggaagtcaatgcgacgtccattgcggatgtaattgccgactggactgga
atccctgtcggtagcatggtgcgagatgaccttcaaaatctactgacctttgacgcggct
ttgggtgaagacattattgggcaagacggtgcgatcagagcgattggtcagagccttaga
gcgaataaagcgaagcttcgatttacggaagggccgcaaggtgtctttttattggctggc
cccagtggtgttggtaaaacggaaaccgccaaaaaaattgcaaaacacttgtttggtagt
gaacgctcacttatcacgattaatatgagtgagtaccaagaagctcatactgtttctcaa
ttaaaaggctcgcctccaggctatgtcggttatggacaaggtggtttgttaacggaagcg
gtgcgtcaaaagccatattctgtcgttttactcgacgaggtagaaaaagcacacgttgat
gttatgaacgtcttctaccaagtgtttgatcagggcattatgcgtgatggtgaaggaagg
gaaatcgactttaaaaacaccattatactcatgacttctaacttaggctctgagcttatt
atggaggcaatgtcagacagaaacgagaattcagagagcgatgatgtggatttgagtttc
tctgaaaatgagacgctaaaatccgacgattcagttgctaattcagcaatcactgacgtg
agtggcggtggcaacgaacgcgatagctctgacgatgacaaaggtgagaatgatgacgga
aaaatagaatacacaccaccttcaacgttggaactggaagcactgattcaacctactgtt
gctcaacactttgctcccgcattagctgctcgaatgcagatcgtgccctttgtttcgctt
aatgaagagtcattaaaagccattgtgacgcacaagctcgataagcttgctgaacgctta
atgtcagagtacaaaatggaattgcgttgtgacgagtctgcgctcgatatgttgttgtct
ttgtgtcaggaaagtcacgcaggggcgcgtttaatcaaccaacgtattgaatccctctta
tcctcacgaatcgccaatgaaatacttcattatctagtcgaatccgatttgccagacatt
ctacaaatgacggcatcagaaaatggcacgatcgatgtggtgtttctcgataagcaagct
ggtggtcaacaaaacgccttgcttgatgattcaatagaggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (36)   

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